RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 MANEALQ5VSG8 457 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 FAM180BQ6P0A1 224 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LANCL3Q6ZV70 420 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 SLC5A8Q8N695 610 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 PACRGLQ8N7B6 248 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LSM14AQ8ND56 463 aaKnown RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 HCFC1R1Q9NWW0 138 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 CTSAP10619 480 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 CHRNB4P30926 498 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 TAS2R38P59533 333 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 KLHDC10Q6PID8 442 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 GPRIN1Q7Z2K8 1008 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 DTX3Q8N9I9 347 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF431Q8TF32 576 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 NELL2Q99435 816 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 HOXD1Q9GZZ0 328 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 RAB9BQ9NP90 201 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 PAK1IP1Q9NWT1 392 aaPredicted RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 MCTS1Q9ULC4 181 aaKnown RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LRRC42Q9Y546 428 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 RTCAO00442 366 aaKnown RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 AK1P00568 194 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 RHCEP18577 417 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 CNPY1Q3B7I2 92 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 PRR22Q8IZ63 422 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 HS3ST5Q8IZT8 346 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF675Q8TD23 568 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 STARD5Q9NSY2 213 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 PTTG2Q9NZH5 202 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 BORCS7-ASMTA0A0B4J1R7 106 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 C2orf72A6NCS6 295 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LATS1O95835 1130 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LCATP04180 440 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 FNTBP49356 437 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 AKR1C2P52895 323 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 CLDN2P57739 230 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 C6orf136Q5SQH8 315 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 MRPL21Q7Z2W9 205 aaKnown RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 LHFPL3Q86UP9 236 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 ZFAND4Q86XD8 727 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 TOE1Q96GM8 510 aaKnown RBP10.68□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF649Q9BS31 505 aa10.68□□□□□ -0.7
PTCH1-205ENST00000418258 DLGAP1O14490 977 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ATG12O94817 140 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 TMEM225BP0DP42 221 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SLC2A5P22732 501 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SERTAD2Q14140 314 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ZNF610Q8N9Z0 462 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 MAFIPQ8WZ33 124 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 RRNAD1Q96FB5 475 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 DKK3Q9UBP4 350 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 MKLN1Q9UL63 735 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 PIGBOS1A0A0B4J2F0 54 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ANHXE9PGG2 379 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 YY2O15391 372 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ADAMTS4O75173 837 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 RP2O75695 350 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 BPIP17213 487 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CEBPBP17676 345 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 HK3P52790 923 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 APOFQ13790 326 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 MFSD13AQ14CX5 517 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 USF2Q15853 346 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 NDUFAF5Q5TEU4 345 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 TSPAN33Q86UF1 283 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 TRIM73Q86UV7 250 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 PQLC3Q8N755 202 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 OR6Q1Q8NGQ2 317 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 FIBINQ8TAL6 211 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SLCO2A1Q92959 643 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 FCRL3Q96P31 734 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 YTHDF1Q9BYJ9 559 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 EIF5A2Q9GZV4 153 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ZDHHC18Q9NUE0 388 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SLC19A2O60779 497 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 P2RY2P41231 377 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SLC18A1P54219 525 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 DOC2AQ14183 400 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CDKN3Q16667 212 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 FBXL20Q96IG2 436 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 MYNNQ9NPC7 610 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 KCMF1Q9P0J7 381 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 KLHL13Q9P2N7 655 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SIGLEC1Q9BZZ2 1709 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 RGS9O75916 674 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ALDOAP04075 364 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CSF2P04141 144 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 PABPC4LP0CB38 370 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 S100PP25815 95 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 WDR4P57081 412 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 CTXN1P60606 82 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SIM1P81133 766 aaPredicted RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 EFR3AQ14156 821 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 ZBED5Q49AG3 693 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 SLC22A16Q86VW1 577 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 MYEF2Q9P2K5 600 aaKnown RBP10.67□□□□□ -0.7
PTCH1-205ENST00000418258 F5H5K5 113 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 TMX2-CTNND1H3BSU7 103 aa10.67□□□□□ -0.7
PTCH1-205ENST00000418258 LILRB3O75022 631 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms