RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ANKRD42Q8N9B4 389 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 GOLM1Q8NBJ4 401 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 OR4N2Q8NGD1 307 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 OR6Y1Q8NGX8 325 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 MGARPQ8TDB4 240 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 HGDQ93099 445 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 CTHRC1Q96CG8 243 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 OMA1Q96E52 524 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 CCDC126Q96EE4 140 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 RBM18Q96H35 190 aaKnown RBP9.39□□□□□ -0.91
HDLBP-206ENST00000417540 JSRP1Q96MG2 331 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-206ENST00000417540 VSTM2LQ96N03 204 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 SMC6Q96SB8 1091 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 TMEM109Q9BVC6 243 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 FAIM2Q9BWQ8 316 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 GLIPR2Q9H4G4 154 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 ZDHHC11Q9H8X9 412 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 FOLH1BQ9HBA9 442 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 LRTM1Q9HBL6 345 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 SACM1LQ9NTJ5 587 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 ZDHHC2Q9UIJ5 367 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 MID2Q9UJV3 735 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 ZNF835Q9Y2P0 537 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 TEP1Q99973 2627 aaKnown RBP9.39□□□□□ -0.91
HDLBP-206ENST00000417540 ZNF469Q96JG9 3925 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-206ENST00000417540 HCFC1P51610 2035 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 ITPR2Q14571 2701 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 CACNA1DQ01668 2161 aa9.39□□□□□ -0.91
HDLBP-206ENST00000417540 CELSR1Q9NYQ6 3014 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 MYO9AB2RTY4 2548 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 SYNDIG1LA6NDD5 238 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 GOLGA6L10A6NI86 522 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 GNB5O14775 395 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 RGS16O15492 202 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 DYRK3O43781 588 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 NPHS1O60500 1241 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 UGT2B11O75310 529 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 CSNK2A2P19784 350 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 GALNSP34059 522 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 DEKP35659 375 aaKnown RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 TRPC1P48995 793 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 NCBP2P52298 156 aaKnown RBP eCLIP9.38□□□□□ -0.914e-8■■■■□ 22.1
HDLBP-206ENST00000417540 TRA2BP62995 288 aaKnown RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 KCNJ2P63252 427 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 C2orf80Q0P641 193 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 HSPB3Q12988 150 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 PTGR1Q14914 329 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 CEBPEQ15744 281 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 CHI3L2Q15782 390 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 RFTN2Q52LD8 501 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 C6orf163Q5TEZ5 329 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 PLXDC2Q6UX71 529 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 TRILQ7L0X0 811 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 MAMDC2Q7Z304 686 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 ZNF551Q7Z340 670 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 FAM9CQ8IZT9 166 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 OR5M9Q8NGP3 310 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 SPPL2AQ8TCT8 520 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 ZNF675Q8TD23 568 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 EFHD2Q96C19 240 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-206ENST00000417540 RILPQ96NA2 401 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 SORT1Q99523 831 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 FAM173AQ9BQD7 235 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 SLC35C2Q9NQQ7 365 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 PNPLA3Q9NST1 481 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 BAIAP2L1Q9UHR4 511 aa9.38□□□□□ -0.91
HDLBP-206ENST00000417540 DOCK7Q96N67 2140 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 MYO1GB0I1T2 1018 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 NPIPA2E9PIF3 369 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 NPIPB8E9PQR5 432 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 NPIPA3F8WFD2 350 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 PSMG1O95456 288 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 P04436 131 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 DHRS4L1P0CG22 281 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 PRPH2P23942 346 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 OPN5Q6U736 354 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 GK5Q6ZS86 529 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 DOLPP1Q86YN1 238 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 FAM109AQ8N4B1 249 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 KRTCAP2Q8N6L1 136 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 POGLUT1Q8NBL1 392 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 OR5L2Q8NGL0 311 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 FAM57AQ8TBR7 257 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 DIO2Q92813 273 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 TMBIM1Q969X1 311 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 RELTQ969Z4 430 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 ZNF597Q96LX8 424 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 AMDHD1Q96NU7 426 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 BTBD9Q96Q07 612 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 DMRTA2Q96SC8 542 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 CCT7Q99832 543 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 KLHDC3Q9BQ90 382 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 DOHHQ9BU89 302 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 OSBPL11Q9BXB4 747 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 RTN4RQ9BZR6 473 aa9.37□□□□□ -0.91
HDLBP-206ENST00000417540 ROPN1BQ9BZX4 212 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-206ENST00000417540 ROPN1Q9HAT0 212 aaPredicted RBP9.37□□□□□ -0.91
HDLBP-206ENST00000417540 EQTNQ9NQ60 294 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms