RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ROGDIQ9GZN7 287 aa12.48□□□□□ -0.41
SSB-204ENST00000417292 NMRAL1Q9HBL8 299 aa12.48□□□□□ -0.41
SSB-204ENST00000417292 SPACA6W5XKT8 324 aa12.48□□□□□ -0.41
SSB-204ENST00000417292 A0A1W2PNV4 684 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 MSTNO14793 375 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 RIPK2O43353 540 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 SH3BGRLO75368 114 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 STK16O75716 305 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 SCELO95171 688 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 TGM6O95932 706 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 S100BP04271 92 aaPredicted RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 ALOX15P16050 662 aaPredicted RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 CD79BP40259 229 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 PCYT1AP49585 367 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 SERPINB8P50452 374 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 GAB1Q13480 694 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 DOC2AQ14183 400 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 SPRED3Q2MJR0 410 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 C10orf62Q5T681 223 aaPredicted RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 C18orf63Q68DL7 685 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 SULT1C3Q6IMI6 304 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 ZNF474Q6S9Z5 364 aaPredicted RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 ZNF550Q7Z398 422 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 HIPK1Q86Z02 1210 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 ST13P4Q8IZP2 240 aaPredicted RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 C7orf57Q8NEG2 295 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 CTHRC1Q96CG8 243 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 STARD4Q96DR4 205 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 ATOH8Q96SQ7 321 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 SORBS1Q9BX66 1292 aaKnown RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 MS4A8Q9BY19 250 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 ACBD3Q9H3P7 528 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 EHD1Q9H4M9 534 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 RPF2Q9H7B2 306 aaKnown RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 RYDENQ9NUL5 291 aaKnown RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 DNAJC11Q9NVH1 559 aa12.47□□□□□ -0.41
SSB-204ENST00000417292 PTBP2Q9UKA9 531 aaKnown RBP12.47□□□□□ -0.41
SSB-204ENST00000417292 CR1P17927 2039 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 C2orf92A0A1B0GVN3 265 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 EXOC1LA0A1B0GW35 172 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 LRRC14BA6NHZ5 514 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 OR6C76A6NM76 312 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 CAPN14A8MX76 684 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 TRIM49D1C9J1S8 452 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 SAP18O00422 153 aaKnown RBP12.46□□□□□ -0.41
SSB-204ENST00000417292 PHF1O43189 567 aaPredicted RBP12.46□□□□□ -0.41
SSB-204ENST00000417292 KERAO60938 352 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 SMNDC1O75940 238 aaKnown RBP eCLIP12.46□□□□□ -0.41
SSB-204ENST00000417292 MTHFD2P13995 350 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 EPORP19235 508 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 GCAP28676 217 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 SSTR4P31391 388 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 GGT5P36269 586 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 UGT2B10P36537 528 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 STARP49675 285 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 ATP5J2P56134 94 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 SLAMF1Q13291 335 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 FAM83EQ2M2I3 478 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 VWA1Q6PCB0 445 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 TRIM42Q8IWZ5 723 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 PRR22Q8IZ63 422 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 PDPRQ8NCN5 879 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 SRFBP1Q8NEF9 429 aaKnown RBP12.46□□□□□ -0.41
SSB-204ENST00000417292 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 ZNF473Q8WTR7 871 aaKnown RBP12.46□□□□□ -0.41
SSB-204ENST00000417292 TANKQ92844 425 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 RIT1Q92963 219 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 TP53INP1Q96A56 240 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 WDR34Q96EX3 536 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 ZC3HAV1LQ96H79 300 aaKnown RBP12.46□□□□□ -0.41
SSB-204ENST00000417292 GPR78Q96P69 363 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 FAM111AQ96PZ2 611 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 TXLNGYQ9BZA5 131 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 GPRC5BQ9NZH0 403 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 NUDT4Q9NZJ9 180 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 EXPH5Q8NEV8 1989 aa12.46□□□□□ -0.41
SSB-204ENST00000417292 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 CLGNO14967 610 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 KLHL2O95198 593 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 SSR2P43308 183 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 GFRA1P56159 465 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 EEF1A1P68104 462 aaKnown RBP12.45□□□□□ -0.42
SSB-204ENST00000417292 PCDH1Q08174 1060 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 BIKQ13323 160 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 SLC29A2Q14542 456 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 PDK4Q16654 411 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 PFKFB4Q16877 469 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 AP5B1Q2VPB7 878 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 DESI1Q6ICB0 168 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 ANGPTL8Q6UXH0 198 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 TRMT10CQ7L0Y3 403 aaKnown RBP12.45□□□□□ -0.42
SSB-204ENST00000417292 TCAIMQ8N3R3 496 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 TMEM171Q8WVE6 324 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 PTCD3Q96EY7 689 aaKnown RBP12.45□□□□□ -0.42
SSB-204ENST00000417292 CAPS2Q9BXY5 557 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 CD244Q9BZW8 370 aa12.45□□□□□ -0.42
SSB-204ENST00000417292 OPN3Q9H1Y3 402 aaPredicted RBP12.45□□□□□ -0.42
SSB-204ENST00000417292 CNOT10Q9H9A5 744 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms