RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DUSP8Q13202 625 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 GSTA3Q16772 222 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 DPY19L1Q2PZI1 675 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 FHL5Q5TD97 284 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 RTL4Q6ZR62 310 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 OR2L13Q8N349 312 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 VPS37AQ8NEZ2 397 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 OR5P2Q8WZ92 322 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 HSPBAP1Q96EW2 488 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 MAGED4Q96JG8 741 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 LCORQ96JN0 433 aaPredicted RBP21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 KLHL1Q9NR64 748 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 AGPAT4Q9NRZ5 378 aa21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 KLF13Q9Y2Y9 288 aaPredicted RBP21.34■■□□□ 1.01
SMARCB1-205ENST00000417137 CPAMD8Q8IZJ3 1885 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 UPK1AO00322 258 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 POLR3GO15318 223 aaPredicted RBP21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 EDF1O60869 148 aaKnown RBP21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 NADKO95544 446 aaPredicted RBP21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 ALDOCP09972 364 aaKnown RBP21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 TMED10P49755 219 aaKnown RBP21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 AQP5P55064 265 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 FAM180AQ6UWF9 173 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 GOLM1Q8NBJ4 401 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 SIMC1Q8NDZ2 872 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 TESCQ96BS2 214 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 SNRNP40Q96DI7 357 aaKnown RBP21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 OR52B2Q96RD2 323 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 ZBTB18Q99592 522 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 ITPAQ9BY32 194 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 ANKRA2Q9H9E1 313 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 TCF7L2Q9NQB0 619 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 NPFFR2Q9Y5X5 522 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 GPR45Q9Y5Y3 372 aa21.33■■□□□ 1.01
SMARCB1-205ENST00000417137 KLRC4-KLRK1H3BQV0 150 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 NME2P1O60361 137 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 FBXO45P0C2W1 286 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 NME2P22392 152 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 KIR3DL1P43629 444 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 IDH3AP50213 366 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 ZNHIT3Q15649 155 aaPredicted RBP21.32■■□□□ 1
SMARCB1-205ENST00000417137 ZNF791Q3KP31 576 aaPredicted RBP21.32■■□□□ 1
SMARCB1-205ENST00000417137 ANXA8L1Q5VT79 327 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 GALNTL5Q7Z4T8 443 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 ZNF227Q86WZ6 799 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 OR8J2Q8NGG1 315 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 DNAJB8Q8NHS0 232 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 SPACA9Q96E40 222 aaPredicted RBP21.32■■□□□ 1
SMARCB1-205ENST00000417137 SIKE1Q9BRV8 207 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 CCDC28BQ9BUN5 200 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 NXF5Q9H1B4 397 aaKnown RBP21.32■■□□□ 1
SMARCB1-205ENST00000417137 FOLH1BQ9HBA9 442 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 DTX4Q9Y2E6 619 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 GPR55Q9Y2T6 319 aaPredicted RBP21.32■■□□□ 1
SMARCB1-205ENST00000417137 CROCCQ5TZA2 2017 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 CNTRLQ7Z7A1 2325 aa21.32■■□□□ 1
SMARCB1-205ENST00000417137 FRG2CA6NGY1 282 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 TTC36A6NLP5 189 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 ANKRD28O15084 1053 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 CFLARO15519 480 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 ZNF354AO60765 605 aaPredicted RBP21.31■■□□□ 1
SMARCB1-205ENST00000417137 ERN1O75460 977 aaKnown RBP21.31■■□□□ 1
SMARCB1-205ENST00000417137 CRYABP02511 175 aaKnown RBP21.31■■□□□ 1
SMARCB1-205ENST00000417137 NAGAP17050 411 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 PRR5P85299 388 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 PDCD4Q53EL6 469 aaKnown RBP21.31■■□□□ 1
SMARCB1-205ENST00000417137 BCORP1Q8N888 145 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 GLB1L3Q8NCI6 653 aaPredicted RBP21.31■■□□□ 1
SMARCB1-205ENST00000417137 PSD4Q8NDX1 1056 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 VSTM2LQ96N03 204 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 BTBD9Q96Q07 612 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 CLMPQ9H6B4 373 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 NEUROD4Q9HD90 331 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 PCDHGB4Q9UN71 923 aa21.31■■□□□ 1
SMARCB1-205ENST00000417137 E9PBE3 544 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 RNASET2O00584 256 aaKnown RBP21.3■■□□□ 1
SMARCB1-205ENST00000417137 TP53I11O14683 189 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 TO15178 435 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 EMC8O43402 210 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 P04436 131 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 EFNA1P20827 205 aaPredicted RBP21.3■■□□□ 1
SMARCB1-205ENST00000417137 S100A3P33764 101 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 NME5P56597 212 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 UFM1P61960 85 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 RPP38P78345 283 aaKnown RBP21.3■■□□□ 1
SMARCB1-205ENST00000417137 ZNF155Q12901 538 aaPredicted RBP21.3■■□□□ 1
SMARCB1-205ENST00000417137 SLC22A10Q63ZE4 541 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 LYPD8Q6UX82 237 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 MDGA2Q7Z553 956 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 NUP43Q8NFH3 380 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 NUDT8Q8WV74 236 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 HES7Q9BYE0 225 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 SACM1LQ9NTJ5 587 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 NTMQ9P121 344 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 BOD1L1Q8NFC6 3051 aa21.3■■□□□ 1
SMARCB1-205ENST00000417137 PRSS51A0A1B0GVH4 220 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 PEX1O43933 1283 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 SLC22A3O75751 556 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 PSMG1O95456 288 aa21.29■■□□□ 1
SMARCB1-205ENST00000417137 C6orf47O95873 294 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms