RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FGF4P08620 206 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 TSPAN8P19075 237 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 SOX18P35713 384 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 KCNJ2P63252 427 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 LTBQ06643 244 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 BST1Q10588 318 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 TRAF3Q13114 568 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 HIST2H2ACQ16777 129 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-202ENST00000416769 GGTA1PQ4G0N0 100 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 FLYWCH1Q4VC44 716 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-202ENST00000416769 HIST2H2AA3Q6FI13 130 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 GRHL2Q6ISB3 625 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 OPN5Q6U736 354 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 KRT78Q8N1N4 520 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 LRRC25Q8N386 305 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-202ENST00000416769 FAM13CQ8NE31 585 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 OR4F6Q8NGB9 312 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 OR52B6Q8NGF0 335 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 OR8K3Q8NH51 312 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 NEIL3Q8TAT5 605 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 LRRC8CQ8TDW0 803 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 PAQR8Q8TEZ7 354 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 SPACA9Q96E40 222 aaPredicted RBP11.83□□□□□ -0.52
LINC00339-202ENST00000416769 SGCZQ96LD1 299 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 GAL3ST4Q96RP7 486 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 MS4A8Q9BY19 250 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 ACTR8Q9H981 624 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 MID1IP1Q9NPA3 183 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 TRPS1Q9UHF7 1281 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 ZNF225Q9UK10 706 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 SLC6A5Q9Y345 797 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 EXPH5Q8NEV8 1989 aa11.83□□□□□ -0.52
LINC00339-202ENST00000416769 C15orf38-AP3S2A0A0A6YYH1 394 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 UBFD1O14562 309 aaKnown RBP11.82□□□□□ -0.52
LINC00339-202ENST00000416769 HCN1O60741 890 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 SNNO75324 88 aaPredicted RBP11.82□□□□□ -0.52
LINC00339-202ENST00000416769 OR4F21O95013 312 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 HSPA4LO95757 839 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 ENO1P06733 434 aaKnown RBP11.82□□□□□ -0.52
LINC00339-202ENST00000416769 HNRNPH2P55795 449 aaKnown RBP11.82□□□□□ -0.52
LINC00339-202ENST00000416769 ERVK-8P63133 956 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
LINC00339-202ENST00000416769 CRYZQ08257 329 aaKnown RBP11.82□□□□□ -0.52
LINC00339-202ENST00000416769 DUSP8Q13202 625 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 MPEG1Q2M385 716 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 PAGE2BQ5JRK9 111 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 FAM219BQ5XKK7 198 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 SLC22A10Q63ZE4 541 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 TMEM198Q66K66 360 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 DESI1Q6ICB0 168 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 GPRIN3Q6ZVF9 776 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 KIRREL3Q8IZU9 778 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 TTLQ8NG68 377 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 ZNF473Q8WTR7 871 aaKnown RBP11.82□□□□□ -0.52
LINC00339-202ENST00000416769 UBE2E3Q969T4 207 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 ALPK1Q96QP1 1244 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 C20orf27Q9GZN8 174 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 OR51B5Q9H339 312 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 CCDC134Q9H6E4 229 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 LYRM4Q9HD34 91 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 ZFP64Q9NPA5 681 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 HAO1Q9UJM8 370 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 ERVK-19Q9WJR5 959 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 RNF11Q9Y3C5 154 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 RAP2CQ9Y3L5 183 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 TSC22D4Q9Y3Q8 395 aa11.82□□□□□ -0.52
LINC00339-202ENST00000416769 GLOD5A6NK44 160 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 H0YIV9 168 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 CHRNGP07510 517 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 FBXO45P0C2W1 286 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 PCNAP12004 261 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 HIST1H1TP22492 207 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-202ENST00000416769 CPN2P22792 545 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 GSTM2P28161 218 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 CEACAM8P31997 349 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-202ENST00000416769 ARRB2P32121 409 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 ARL1P40616 181 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-202ENST00000416769 STT3AP46977 705 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 ASCL1P50553 236 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 FBXW4P57775 412 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 GUCY1A3Q02108 690 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 FNDC7Q5VTL7 733 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 LETMD1Q6P1Q0 360 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 MED27Q6P2C8 311 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 CHSY3Q70JA7 882 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 LAS2Q8IYD9 372 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 FBXW8Q8N3Y1 598 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 OR5L2Q8NGL0 311 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 GOT1L1Q8NHS2 421 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-202ENST00000416769 NUBPLQ8TB37 319 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 RNASE6Q93091 150 aaKnown RBP11.81□□□□□ -0.52
LINC00339-202ENST00000416769 CDK15Q96Q40 435 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 SORT1Q99523 831 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 ZNF395Q9H8N7 513 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-202ENST00000416769 PLEKHF2Q9H8W4 249 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 PSD3Q9NYI0 1048 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 COPS7AQ9UBW8 275 aa11.81□□□□□ -0.52
LINC00339-202ENST00000416769 ADGRE2Q9UHX3 823 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms