RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CD200R1LQ6Q8B3 271 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 SLC36A4Q6YBV0 504 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ZER1Q7Z7L7 766 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 NUDT13Q86X67 352 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 BMPERQ8N8U9 685 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 MORN4Q8NDC4 146 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 TMIEQ8NEW7 156 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 TMEM163Q8TC26 289 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 TM9SF4Q92544 642 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 DIRAS2Q96HU8 199 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 LRR1Q96L50 414 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 F2RL3Q96RI0 385 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 TM9SF2Q99805 663 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ABCG4Q9H172 646 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 ANKRA2Q9H9E1 313 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 B3GAT2Q9NPZ5 323 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 RPRD1BQ9NQG5 326 aaKnown RBP9.24□□□□□ -0.93
CD44-206ENST00000415148 ASF1AQ9Y294 204 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 CLCA3PQ9Y6N3 262 aa9.24□□□□□ -0.93
CD44-206ENST00000415148 XIRP2A4UGR9 3374 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SLC9A3R1O14745 358 aaPredicted RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 CASC3O15234 703 aaKnown RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 CCL16O15467 120 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SPINT1O43278 529 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 HCN1O60741 890 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TMCC2O75069 709 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TRIM3O75382 744 aaPredicted RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 NCR1O76036 304 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 CXCL14O95715 111 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 HLA-DQB1P01920 261 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 FGBP02675 491 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 YES1P07947 543 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 CCNYL3P0C7X3 344 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 NR2F1P10589 423 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 GABRA5P31644 462 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 CA8P35219 290 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 PRMT2P55345 433 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ST8SIA6P61647 398 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 PPP3R1P63098 170 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 REEP5Q00765 189 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 DBPQ10586 325 aaPredicted RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 TEAD2Q15562 447 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SYPL1Q16563 259 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ATAT1Q5SQI0 421 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 RAET1GQ6H3X3 334 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ACSM5Q6NUN0 579 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ZNF730Q6ZMV8 503 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 QSOX2Q6ZRP7 698 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SHFQ7M4L6 423 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 LIX1LQ8IVB5 337 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ANKRD53Q8N9V6 530 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ATP6V1C2Q8NEY4 427 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 OR4K5Q8NGD3 323 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 GNPDA2Q8TDQ7 276 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 VWCEQ96DN2 955 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ZC3HAV1LQ96H79 300 aaKnown RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 SLC35G5Q96KT7 338 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 PRRC1Q96M27 445 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 FRMD6Q96NE9 622 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TOX2Q96NM4 488 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 CAMK1GQ96NX5 476 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 GPA33Q99795 319 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SOSTQ9BQB4 213 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 OR51I1Q9H343 314 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 MTG2Q9H4K7 406 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 DDX31Q9H8H2 851 aaKnown RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 RNF121Q9H920 327 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ITM2BQ9Y287 266 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SPIN1Q9Y657 262 aaPredicted RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 LTBP2Q14767 1821 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 A0A0G2JPF8 293 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 HNRNPCL2B2RXH8 293 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 FAM25AB3EWG3 89 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 FAM25CB3EWG5 89 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 FAM25GB3EWG6 89 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 HNRNPCL3B7ZW38 293 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 KPNA3O00505 521 aaPredicted RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 DVL2O14641 736 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 MOSPD3O75425 235 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 FGF18O76093 207 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 EPHX1P07099 455 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 CISD3P0C7P0 127 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 HNRNPCL4P0DMR1 293 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 OR12D1P0DN82 309 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SDHBP21912 280 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 CPN2P22792 545 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SOX18P35713 384 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 KHKP50053 298 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 P2RX3P56373 397 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SNAPC1Q16533 368 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TMEM44Q2T9K0 475 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 POM121L1PQ3SYA9 428 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 MINDY4Q4G0A6 757 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TMEM52BQ4KMG9 183 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 PYDC2Q56P42 97 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 LCN1P1Q5VSP4 162 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TIGD3Q6B0B8 471 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 LAMTOR1Q6IAA8 161 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 BHLHB9Q6PI77 547 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TMEM64Q6YI46 380 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms