RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 MAP4K2Q12851 820 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 CSTF3Q12996 717 aaKnown RBP14.21□□□□□ -0.13
ACTB-202ENST00000414620 FAM153CQ494X1 144 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 ACSF3Q4G176 576 aaPredicted RBP14.21□□□□□ -0.13
ACTB-202ENST00000414620 DCST1Q5T197 706 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 TRMT10CQ7L0Y3 403 aaKnown RBP14.21□□□□□ -0.13
ACTB-202ENST00000414620 RELL2Q8NC24 303 aaPredicted RBP14.21□□□□□ -0.13
ACTB-202ENST00000414620 NAXEQ8NCW5 288 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 C17orf47Q8NEP4 570 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 TNIP2Q8NFZ5 429 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 METTL6Q8TCB7 284 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 NRGNQ92686 78 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 HGDQ93099 445 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 EXOSC8Q96B26 276 aaKnown RBP14.21□□□□□ -0.13
ACTB-202ENST00000414620 APIPQ96GX9 242 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 TMEM41AQ96HV5 264 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 LCORQ96JN0 433 aaPredicted RBP14.21□□□□□ -0.13
ACTB-202ENST00000414620 ZNF681Q96N22 645 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 SECISBP2Q96T21 854 aaKnown RBP14.21□□□□□ -0.13
ACTB-202ENST00000414620 TIMP4Q99727 224 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 OSBPL11Q9BXB4 747 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 ACPTQ9BZG2 426 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 UBQLN3Q9H347 655 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 GALNT9Q9HCQ5 603 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 KLRF1Q9NZS2 232 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 TBK1Q9UHD2 729 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 ZNF639Q9UID6 485 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 MCM8Q9UJA3 840 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 PSME2Q9UL46 239 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 CFL2Q9Y281 166 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 DLGAP4Q9Y2H0 992 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 TIMM22Q9Y584 194 aa14.21□□□□□ -0.13
ACTB-202ENST00000414620 MED13LQ71F56 2210 aa14.21□□□□□ -0.14
ACTB-202ENST00000414620 GNG14A0A1W2PPG7 69 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 UGT2B11O75310 529 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 ZWINTO95229 277 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 HPNP05981 417 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 PYGBP11216 843 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 HSD3B1P14060 373 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 BMP5P22003 454 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 ATP5F1P24539 256 aaPredicted RBP14.2□□□□□ -0.14
ACTB-202ENST00000414620 HSD3B2P26439 372 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 PTPN6P29350 595 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 UQCRC1P31930 480 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 TRA2BP62995 288 aaKnown RBP14.2□□□□□ -0.14
ACTB-202ENST00000414620 SLC25A35Q3KQZ1 300 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 CES4AQ5XG92 561 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 YRDCQ86U90 279 aaKnown RBP14.2□□□□□ -0.14
ACTB-202ENST00000414620 IFT20Q8IY31 132 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 ZZZ3Q8IYH5 903 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 CCDC116Q8IYX3 515 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 CEP112Q8N8E3 955 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 OR1J4Q8NGS1 313 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 OR9A2Q8NGT5 310 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 CDC26Q8NHZ8 85 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 RDH11Q8TC12 318 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 KAT2AQ92830 837 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 UGT2B28Q9BY64 529 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 PSMC3IPQ9P2W1 217 aaPredicted RBP14.2□□□□□ -0.14
ACTB-202ENST00000414620 KCNN3Q9UGI6 736 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 MAPRE3Q9UPY8 281 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 L3MBTL1Q9Y468 752 aa14.2□□□□□ -0.14
ACTB-202ENST00000414620 ANKRD17O75179 2603 aaKnown RBP14.2□□□□□ -0.14
ACTB-202ENST00000414620 HSPB2A8KAH6 182 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 FAM47E-STBD1D6RA91 191 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 SNPHO15079 494 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 ULK1O75385 1050 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 BMP7P18075 431 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 IMPDH1P20839 514 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 TIA1P31483 386 aaKnown RBP eCLIP14.19□□□□□ -0.146e-28■■□□□ 12.8
ACTB-202ENST00000414620 PTGDSP41222 190 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 EMDP50402 254 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 PRKAA2P54646 552 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 ACSM2AQ08AH3 577 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 HSPB2Q16082 182 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 ZNF628Q5EBL2 1059 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 ACSM2BQ68CK6 577 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 TIGD3Q6B0B8 471 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 NUP54Q7Z3B4 507 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 MED12LQ86YW9 2145 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 SLC22A9Q8IVM8 553 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 FAM83FQ8NEG4 500 aaPredicted RBP14.19□□□□□ -0.14
ACTB-202ENST00000414620 KIF18AQ8NI77 898 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 TMBIM1Q969X1 311 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 CTHRC1Q96CG8 243 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 HSPBAP1Q96EW2 488 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 TRIB1Q96RU8 372 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 SERHLQ9NQF3 203 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 PRODH2Q9UF12 536 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 PCDHGB3Q9Y5G1 929 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 POLQO75417 2590 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 PCNX3Q9H6A9 2034 aa14.19□□□□□ -0.14
ACTB-202ENST00000414620 OTOGQ6ZRI0 2925 aa14.18□□□□□ -0.14
ACTB-202ENST00000414620 PRAMEF25A6NGN4 478 aa14.18□□□□□ -0.14
ACTB-202ENST00000414620 AHRRA9YTQ3 701 aa14.18□□□□□ -0.14
ACTB-202ENST00000414620 KIF2AO00139 706 aaPredicted RBP14.18□□□□□ -0.14
ACTB-202ENST00000414620 EPPINO95925 133 aa14.18□□□□□ -0.14
ACTB-202ENST00000414620 AGFG1P52594 562 aaKnown RBP14.18□□□□□ -0.14
ACTB-202ENST00000414620 FOXA1P55317 472 aa14.18□□□□□ -0.14
ACTB-202ENST00000414620 CORO7P57737 925 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms