RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 CLECL1Q8IZS7 167 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 SHISA5Q8N114 240 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 CDC26Q8NHZ8 85 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 LRFN5Q96NI6 719 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 SERINC2Q96SA4 455 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 SCN2AQ99250 2005 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ROGDIQ9GZN7 287 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 LIN28AQ9H9Z2 209 aaKnown RBP9.35□□□□□ -0.91
DDB1-202ENST00000414411 ANKHQ9HCJ1 492 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 KCMF1Q9P0J7 381 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 C3orf18Q9UK00 162 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 ERVK-11Q9UQG0 969 aa9.35□□□□□ -0.91
DDB1-202ENST00000414411 CCDC88CQ9P219 2028 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 A0A1B0GX78 115 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 SGK494L7N484 410 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 TMPRSS11DO60235 418 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 TNFSF15O95150 251 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 GBAP04062 536 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 LAMP1P11279 417 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 ALAS2P22557 587 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 CERS1P27544 350 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 TIA1P31483 386 aaKnown RBP eCLIP9.34□□□□□ -0.91
DDB1-202ENST00000414411 SSR2P43308 183 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 PPP1R8Q12972 351 aaKnown RBP9.34□□□□□ -0.91
DDB1-202ENST00000414411 KCNAB2Q13303 367 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 C11orf91Q3C1V1 193 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 RBM48Q5RL73 367 aaKnown RBP9.34□□□□□ -0.91
DDB1-202ENST00000414411 ANKRD34AQ69YU3 496 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 ANKRD26P1Q6NSI1 321 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 ZNF517Q6ZMY9 492 aaPredicted RBP9.34□□□□□ -0.91
DDB1-202ENST00000414411 ZNF621Q6ZSS3 439 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 KCTD8Q6ZWB6 473 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 PTOV1Q86YD1 416 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 HIPK1Q86Z02 1210 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 ZDHHC21Q8IVQ6 265 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 ZNF555Q8NEP9 628 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 OR10Q1Q8NGQ4 319 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 ZNF420Q8TAQ5 688 aaPredicted RBP9.34□□□□□ -0.91
DDB1-202ENST00000414411 TBC1D20Q96BZ9 403 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 DUSP26Q9BV47 211 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 NRSN2Q9GZP1 204 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 CXorf21Q9HAI6 301 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 SLC22A11Q9NSA0 550 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 VNN3Q9NY84 501 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 TMEFF2Q9UIK5 374 aaPredicted RBP9.34□□□□□ -0.91
DDB1-202ENST00000414411 CDC14AQ9UNH5 594 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 MAPRE3Q9UPY8 281 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 ASB4Q9Y574 426 aa9.34□□□□□ -0.91
DDB1-202ENST00000414411 FRYQ5TBA9 3013 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 TMEM238LA0A1B0GVL6 79 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 CDRT15L2A8MXV6 281 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 MEN1O00255 615 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 HS6ST1O60243 411 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 PCDH7O60245 1069 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 CPNE3O75131 537 aaKnown RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 ZNF682O95780 498 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 SEMG1P04279 462 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 ANXA4P09525 319 aaPredicted RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 ZNF10P21506 573 aaPredicted RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 CRHBPP24387 322 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 DCKP27707 260 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 HPCAL1P37235 193 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 OR1D4P47884 311 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 SLAMF1Q13291 335 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 SLC9A5Q14940 896 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 RTP5Q14D33 572 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 RFX4Q33E94 735 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 AP1ARQ63HQ0 302 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 SHQ1Q6PI26 577 aaKnown RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 KRT77Q7Z794 578 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 OR5T3Q8NGG3 340 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 HDAC2Q92769 488 aaKnown RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 C12orf43Q96C57 262 aaKnown RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 TM4SF18Q96CE8 201 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 DTNBP1Q96EV8 351 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 MMABQ96EY8 250 aaPredicted RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 DOK1Q99704 481 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 TUBA1CQ9BQE3 449 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 ULBP3Q9BZM4 244 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 GABARAPL1Q9H0R8 117 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 AKIRIN1Q9H9L7 192 aaPredicted RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 LYRM4Q9HD34 91 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 IL1RAPQ9NPH3 570 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 BTNL2Q9UIR0 455 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 RPS6KA6Q9UK32 745 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 DAPP1Q9UN19 280 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 WBP11Q9Y2W2 641 aaKnown RBP9.33□□□□□ -0.92
DDB1-202ENST00000414411 GMEB1Q9Y692 573 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 U3KQV3 271 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 NCOR2Q9Y618 2525 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 CELSR3Q9NYQ7 3312 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 A0A1B0GVG6 124 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 C1orf226A1L170 272 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 ZNF860A6NHJ4 632 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 GABRR3A8MPY1 467 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 PROM1O43490 865 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 CHST10O43529 356 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 B3GALT2O43825 422 aa9.33□□□□□ -0.92
DDB1-202ENST00000414411 RDH16O75452 317 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms