RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 L3MBTL1Q9Y468 752 aa15.78■□□□□ 0.12
SCAMP4-204ENST00000414057 LRRK2Q5S007 2527 aa15.77■□□□□ 0.12
SCAMP4-204ENST00000414057 A0A1B0GUH1 482 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 ZNF860A6NHJ4 632 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 CDK2AP1O14519 115 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 SCN2BO60939 215 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 FAM58BPP0C7Q3 252 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 HSD17B1P14061 328 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 SLC7A2P52569 658 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 PHC1P78364 1004 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 RHAGQ02094 409 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 MEP1AQ16819 746 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 SFT2D3Q587I9 215 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 ACER2Q5QJU3 275 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 C1orf146Q5VVC0 180 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 MRM1Q6IN84 353 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 PAPD4Q6PIY7 484 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 ZNF793Q6ZN11 406 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 C10orf67Q8IYJ2 551 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 SERINC2Q96SA4 455 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 RASSF4Q9H2L5 321 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 IL1RL2Q9HB29 575 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 SERHLQ9NQF3 203 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 TAS2R7Q9NYW3 318 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 SH3BP4Q9P0V3 963 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 SUCOQ9UBS9 1254 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 EXO1Q9UQ84 846 aaKnown RBP15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 OSGIN2Q9Y236 505 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 PCDHA9Q9Y5H5 950 aa15.77■□□□□ 0.11
SCAMP4-204ENST00000414057 RP1L1Q8IWN7 2480 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 DOCK10Q96BY6 2186 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 A1L4Q6 167 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 RFXANKO14593 260 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 CHST10O43529 356 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 TMPRSS11DO60235 418 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 PRAMEF2O60811 474 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 CDC123O75794 336 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 PDE5AO76074 875 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 ZNF888P0CJ79 500 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 LAMP1P11279 417 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 WNT3P56703 355 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 EEFSECP57772 596 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 OR4D2P58180 307 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 ACTR3P61158 418 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 CEACAM7Q14002 265 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 NANOGP8Q6NSW7 305 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 H3F3CQ6NXT2 135 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 SLC15A3Q8IY34 581 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 SLC5A8Q8N695 610 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 NR4A3Q92570 626 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 JADE3Q92613 823 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 TMEM125Q96AQ2 219 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 ASB9Q96DX5 294 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 ANKRD27Q96NW4 1050 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 SLC39A3Q9BRY0 314 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 RBCK1Q9BYM8 510 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 PAIP1Q9H074 479 aaKnown RBP15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 MUC13Q9H3R2 512 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 DENND2DQ9H6A0 471 aaPredicted RBP15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 NANOGQ9H9S0 305 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 LANCL2Q9NS86 450 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 CD300AQ9UGN4 299 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 PHF11Q9UIL8 331 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 POMPQ9Y244 141 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 PCDHGB6Q9Y5F9 930 aa15.76■□□□□ 0.11
SCAMP4-204ENST00000414057 TRBV5-3A0A0A0MS03 114 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 C1orf226A1L170 272 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 LRRTM2O43300 516 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 ANP32DO95626 131 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 F10P00742 488 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 ZCCHC18P0CG32 403 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 RNF224P0DH78 156 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 TRAP1Q12931 704 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 BNIP2Q12982 314 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 SLAMF1Q13291 335 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 CAPRIN1Q14444 709 aaKnown RBP15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 QSOX2Q6ZRP7 698 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 HORMAD2Q8N7B1 307 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 OR5T3Q8NGG3 340 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 GOT1L1Q8NHS2 421 aaPredicted RBP15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 NUDT8Q8WV74 236 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 PTCHD1Q96NR3 888 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 PHF12Q96QT6 1004 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 PANX1Q96RD7 426 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 MS4A12Q9NXJ0 267 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 SLAMF8Q9P0V8 285 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 PCDHGB4Q9UN71 923 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 ASB4Q9Y574 426 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 GMEB1Q9Y692 573 aa15.75■□□□□ 0.11
SCAMP4-204ENST00000414057 OR2W5A6NFC9 320 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 C4orf51C9J302 202 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 NME4O00746 187 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 B3GALT2O43825 422 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 STAMBPO95630 424 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 RNH1P13489 461 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 PPIBP23284 216 aaKnown RBP15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 RAB8AP61006 207 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 OLR1P78380 273 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 BTN3A2P78410 334 aa15.74■□□□□ 0.11
SCAMP4-204ENST00000414057 TRIM25Q14258 630 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms