RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 BBS10Q8TAM1 723 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HEXDCQ8WVB3 486 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 RAB24Q969Q5 203 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TMBIM1Q969X1 311 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SEPHS2Q99611 448 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 KIFC1Q9BW19 673 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SLIRPQ9GZT3 109 aaKnown RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SFXN1Q9H9B4 322 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TUBG2Q9NRH3 451 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 STMN3Q9NZ72 180 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TPRKBQ9Y3C4 175 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 STON1Q9Y6Q2 735 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HELZP42694 1942 aaKnown RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 A0A1W2PP18 115 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FAM90A20PA6NIJ5 464 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 A6NL46 340 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 A8MT66 165 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 NEDD8-MDP1E9PL57 170 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 G3V2T6 193 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HRKO00198 91 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 PEX11BO96011 259 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HLA-DQB2P05538 268 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ALDOCP09972 364 aaKnown RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HOXB8P17481 243 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 GABRB1P18505 474 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HOXD9P28356 352 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 OTX2P32243 289 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 IFNA8P32881 189 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 LTBRP36941 435 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FRKP42685 505 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 P2RX3P56373 397 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 EMX1Q04741 257 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 CHRNB3Q05901 458 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 CD47Q08722 323 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FCHO2Q0JRZ9 810 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SLAQ13239 276 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 IHHQ14623 411 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SYT16Q17RD7 645 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 RFX4Q33E94 735 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF404Q494X3 552 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ZFP69Q49AA0 526 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 TECRLQ5HYJ1 363 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FAM76BQ5HYJ3 339 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FAM78AQ5JUQ0 283 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 CERCAMQ5T4B2 595 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 SYT6Q5T7P8 510 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 UBE2UQ5VVX9 321 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 STEAP3Q658P3 488 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 PRR23BQ6ZRT6 265 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 Q7L0L9 218 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HORMAD1Q86X24 394 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 PPP1R3BQ86XI6 285 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 UMODL1-AS1Q8N2C9 162 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 MEIOBQ8N635 442 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FNDC5Q8NAU1 212 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF680Q8NEM1 530 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HCAR2Q8TDS4 363 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ROBO4Q8WZ75 1007 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF479Q96JC4 524 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 GPR87Q9BY21 358 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 CLPBQ9H078 707 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 HDHD2Q9H0R4 259 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 POFUT1Q9H488 388 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 KAT8Q9H7Z6 458 aaKnown RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 AKTIPQ9H8T0 292 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 WSB2Q9NYS7 404 aaPredicted RBP8.88□□□□□ -0.99
SNHG3-201ENST00000413987 C3orf18Q9UK00 162 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 GRIP1Q9Y3R0 1128 aa8.88□□□□□ -0.99
SNHG3-201ENST00000413987 FAM90A18PA6NE21 464 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 FAM90A16PA6NEW6 464 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 HELTA6NFD8 242 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 OTOL1A6NHN0 477 aaPredicted RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 AGAP5A6NIR3 686 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 CLDN24A6NM45 220 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 FAM90A9PA6NNJ1 464 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 C12orf71A8MTZ7 269 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 FAM90A5PA8MXJ8 464 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 H3BQ06 376 aaPredicted RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 UPK1AO00322 258 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 POLR1CO15160 346 aaPredicted RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 FAM90A15PP0C7V4 464 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 FAM90A14PP0C7W9 464 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 LBPP18428 481 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 NMBRP28336 390 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 CD70P32970 193 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 CSKP41240 450 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 MRPL19P49406 292 aaKnown RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 CLK3P49761 638 aaKnown RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 KCNK10P57789 538 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 MESP2Q0VG99 397 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 TRAF3Q13114 568 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 MAB21L1Q13394 359 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF77Q15935 545 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 CARTPTQ16568 116 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 HNRNPA1L2Q32P51 320 aaKnown RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 C4orf17Q53FE4 359 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM31Q5JXX7 168 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM236Q5W0B7 351 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 ESPNLQ6ZVH7 1005 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 IFNEQ86WN2 208 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms