RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 F13BP05160 661 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CRYGCP07315 174 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 HIST1H2AGP0C0S8 130 aaPredicted RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 G6PDP11413 515 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 HIST1H2ADP20671 130 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 AGXTP21549 392 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 HOXC8P31273 242 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TNFSF8P32971 234 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 RGS6P49758 472 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SELENOVP59797 346 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CRYZQ08257 329 aaKnown RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 TWF1Q12792 350 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 NR6A1Q15406 480 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ARSJQ5FYB0 599 aaPredicted RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 MFSD14CQ5VZR4 134 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 HIST2H2AA3Q6FI13 130 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TECPR1Q7Z6L1 1165 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PXKQ7Z7A4 578 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 IQCHQ86VS3 1027 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 RFX6Q8HWS3 928 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 FAM89BQ8N5H3 189 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 OR8J3Q8NGG0 315 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SPPL2AQ8TCT8 520 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SLC39A7Q92504 469 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PIGKQ92643 395 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 HIST1H2AHQ96KK5 128 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TEX37Q96LM6 180 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 MS4A4EQ96PG1 132 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TMEM209Q96SK2 561 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 HIST1H2AJQ99878 128 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 MARVELD1Q9BSK0 173 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CHST5Q9GZS9 411 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 GABARAPL1Q9H0R8 117 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ZDHHC3Q9NYG2 299 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ROBO1Q9Y6N7 1651 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PTPRJQ12913 1337 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CCDC187A0A096LP49 1063 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 FAM86C2PA6NEL3 165 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 G3V3Q6 166 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CCSO14618 274 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 MED7O43513 233 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 RGS11O94810 467 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PPP2CBP62714 309 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PPP2CAP67775 309 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SCN1BQ07699 218 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ZNF252P-AS1Q0IIN9 211 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TDGQ13569 410 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 KEAP1Q14145 624 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 GPR176Q14439 515 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 MOGAT2Q3SYC2 334 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SYTL3Q4VX76 610 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TMEM107Q6UX40 140 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 HSDL2Q6YN16 418 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 C1orf186Q6ZWK4 172 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ZNF534Q76KX8 674 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PROSER1Q86XN7 944 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TMEM151AQ8N4L1 468 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ZNF655Q8N720 491 aaPredicted RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 BPIFCQ8NFQ6 507 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 OR11H7Q8NGC8 314 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 OR5J2Q8NH18 312 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 DNAJB14Q8TBM8 379 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CD300LFQ8TDQ1 290 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CPNE2Q96FN4 548 aaPredicted RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 F2RL3Q96RI0 385 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CGRRF1Q99675 332 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CHRAC1Q9NRG0 131 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 KRT84Q9NSB2 600 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 FAM86C1Q9NVL1 165 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 C2orf42Q9NWW7 574 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 GTSE1Q9NYZ3 720 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ADA2Q9NZK5 511 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 NCDNQ9UBB6 729 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 FOXD3Q9UJU5 478 aaPredicted RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 C3orf18Q9UK00 162 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PCDHA9Q9Y5H5 950 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CLDN16Q9Y5I7 305 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 WDR81Q562E7 1941 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PHIPQ8WWQ0 1821 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GLYATL1P3A0A0U1RQE8 302 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 LRIT2A6NDA9 550 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SLC22A31A6NKX4 558 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 MINDY4BA8MYZ0 360 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 FFAR3O14843 346 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GPR42O15529 346 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 RNF13O43567 381 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 TLR5O60602 858 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 LDLRP01130 860 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GCP02774 474 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 LIPFP07098 398 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 SNHG28P0DPA3 235 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 CD58P19256 250 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 GZMHP20718 246 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 ADH6P28332 368 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PPT1P50897 306 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 MECP2P51608 486 aaKnown RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 DNAJB13P59910 316 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 PMP22Q01453 160 aa4.95□□□□□ -1.62
HERC4-205ENST00000412272 EIF4EBP2Q13542 120 aaPredicted RBP4.95□□□□□ -1.62
HERC4-205ENST00000412272 FCN2Q15485 313 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms