RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SAR1BQ9Y6B6 198 aa12.96□□□□□ -0.33
HLA-DQB2-229ENST00000411527 CBR3O75828 277 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 KLK1P06870 262 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ARL1P40616 181 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PTGDSP41222 190 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 STARP49675 285 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ALDH18A1P54886 795 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DIO3P55073 304 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FAM83EQ2M2I3 478 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 Q5PR19 223 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TMEM81Q6P7N7 255 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FAM111BQ6SJ93 734 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ADGRE4PQ86SQ3 457 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CENPLQ8N0S6 344 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 NUDT8Q8WV74 236 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ATP6V1E2Q96A05 226 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 OMA1Q96E52 524 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 UCN2Q96RP3 112 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ERP44Q9BS26 406 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ITPAQ9BY32 194 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 BRINP2Q9C0B6 783 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PIGMQ9H3S5 423 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 EHD3Q9NZN3 535 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 EXO1Q9UQ84 846 aaKnown RBP12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CFL2Q9Y281 166 aa12.95□□□□□ -0.34
HLA-DQB2-229ENST00000411527 A0A087X1B8 175 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 A8MXE2 369 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SMPD2O60906 423 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SEMA3DO95025 777 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SIX3O95343 332 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CLDN9O95484 217 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 RHOXF2BP0C7M4 288 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CNTFP26441 200 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 DEKP35659 375 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GNG11P61952 73 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PLCXD2Q0VAA5 305 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MGAT2Q10469 447 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MAP4K2Q12851 820 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SNTA1Q13424 505 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GAB1Q13480 694 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 EXOSC7Q15024 291 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PRICKLE4Q2TBC4 344 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CCNYL2Q5T2Q4 361 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 IFNEQ86WN2 208 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CIARTQ8N365 385 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 WDSUB1Q8N9V3 476 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FBF1Q8TES7 1133 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ZNF592Q92610 1267 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 LCORQ96JN0 433 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CDK15Q96Q40 435 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 G6PC3Q9BUM1 346 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 OR2B2Q9GZK3 357 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 NOL11Q9H8H0 719 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 AHSPQ9NZD4 102 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 C6orf203Q9P0P8 240 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CPSF2Q9P2I0 782 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CLCF1Q9UBD9 225 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PACSIN3Q9UKS6 424 aa12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TNPO3Q9Y5L0 923 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB2-229ENST00000411527 NSD1Q96L73 2696 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PRAMEF25A6NGN4 478 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GOLGA6L10A6NI86 522 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 H7C1Q1 480 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 OR7A17O14581 309 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 UGT2B11O75310 529 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ERAL1O75616 437 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 C2P06681 752 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CHMP24386 653 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CPOXP36551 454 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GFRA1P56159 465 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 EEF1A1P68104 462 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ACAP2Q15057 778 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 EEF1A1P5Q5VTE0 462 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TTC19Q6DKK2 380 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 SCIMPQ6UWF3 145 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PAGE2Q7Z2X7 111 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CCDC25Q86WR0 208 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 LRRC75A-AS1Q8N1F1 130 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ADCY4Q8NFM4 1077 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PIGTQ969N2 578 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 COX4I2Q96KJ9 171 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 NAPGQ99747 312 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PIP5K1AQ99755 562 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MRPL1Q9BYD6 325 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TAS2R10Q9NYW0 307 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 GRHL1Q9NZI5 618 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 MAT2BQ9NZL9 334 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 ADAM29Q9UKF5 820 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CES1P1Q9UKY3 287 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TESMINQ9Y4I5 508 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PCDHA9Q9Y5H5 950 aa12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FN1P02751 2386 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB2-229ENST00000411527 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 CCDC189A1A4V9 331 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 C1orf226A1L170 272 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 FAM187AA6NFU0 413 aa12.92□□□□□ -0.34
HLA-DQB2-229ENST00000411527 PLOD2O00469 737 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms