RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 TMPRSS11AQ6ZMR5 421 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 RNF165Q6ZSG1 346 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 LAX1Q8IWV1 398 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 DENND6BQ8NEG7 585 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 ADAMTS15Q8TE58 950 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SLC38A5Q8WUX1 472 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 ZFPM2Q8WW38 1151 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 FGF14Q92915 247 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 PLA2G2FQ9BZM2 168 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 UCK2Q9BZX2 261 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 SLC7A5P2Q9GIP4 190 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 BRF2Q9HAW0 419 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 PRSS16Q9NQE7 514 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 NLGN3Q9NZ94 848 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
COL6A2-204ENST00000409416 CFL2Q9Y281 166 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 KCNE3Q9Y6H6 103 aa12.65□□□□□ -0.38
COL6A2-204ENST00000409416 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 HAT1O14929 419 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 KMOO15229 486 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 TMCC2O75069 709 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 TNFRSF21O75509 655 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 HMGN2P05204 90 aaKnown RBP12.65□□□□□ -0.39
COL6A2-204ENST00000409416 GYPBP06028 91 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.39
COL6A2-204ENST00000409416 TNFSF8P32971 234 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 CDK3Q00526 305 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF45Q02386 682 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 PCDH1Q08174 1060 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 RUNX3Q13761 415 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 IRF4Q15306 451 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF630Q2M218 657 aaPredicted RBP12.65□□□□□ -0.39
COL6A2-204ENST00000409416 FBXO43Q4G163 708 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 REEP3Q6NUK4 255 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 CDC73Q6P1J9 531 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 VRK2Q86Y07 508 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 ANKRD53Q8N9V6 530 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 CYB561A3Q8NBI2 242 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 OR51A7Q8NH64 312 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 GATAD2BQ8WXI9 593 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 SMARCD2Q92925 531 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 GFM1Q96RP9 751 aaKnown RBP12.65□□□□□ -0.39
COL6A2-204ENST00000409416 PSD2Q9BQI7 771 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 MMP28Q9H239 520 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 NKX2-4Q9H2Z4 354 aa12.65□□□□□ -0.39
COL6A2-204ENST00000409416 CFAP54Q96N23 3096 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 ZC3H12DA2A288 527 aaKnown RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 B4DGG1 531 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 B4GALT2O60909 372 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 KLF8O95600 359 aaPredicted RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 RPS19P39019 145 aaKnown RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 KCNC3Q14003 757 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 LRIT3Q3SXY7 679 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 WDR45BQ5MNZ6 344 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 LACC1Q8IV20 430 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 GALNT12Q8IXK2 581 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 FAM160A2Q8N612 972 aaPredicted RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 FAM46DQ8NEK8 389 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 COQ8BQ96D53 544 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 CPEB1Q9BZB8 566 aaKnown RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 ZDHHC5Q9C0B5 715 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 SRMSQ9H3Y6 488 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 SMURF1Q9HCE7 757 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 C1GALT1Q9NS00 363 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 TAAR2Q9P1P5 351 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 KLHL42Q9P2K6 505 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 ZNF221Q9UK13 617 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 ZSCAN5BA6NJL1 495 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 TMEM229AB2RXF0 380 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 IFNA16P05015 189 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 CCNYL3P0C7X3 344 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 SAGP10523 405 aaPredicted RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 LIM2P55344 173 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 C1DQ13901 141 aaKnown RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 SPHARQ15513 63 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 MLIPQ5VWP3 458 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 PLAG1Q6DJT9 500 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 C22orf42Q6IC83 251 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 KLHDC8AQ8IYD2 350 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 VWCEQ96DN2 955 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 SIPA1Q96FS4 1042 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 PDXPQ96GD0 296 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 FAM46AQ96IP4 442 aaKnown RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 CITED4Q96RK1 184 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 TSSK6Q9BXA6 273 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 MTIF3Q9H2K0 278 aaKnown RBP12.64□□□□□ -0.39
COL6A2-204ENST00000409416 MVB12BQ9H7P6 319 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 ATG4BQ9Y4P1 393 aa12.64□□□□□ -0.39
COL6A2-204ENST00000409416 ISPDA4D126 451 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 FAM171A2A8MVW0 826 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 HSD3B1P14060 373 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 ALAS2P22557 587 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 PTX3P26022 381 aaPredicted RBP12.63□□□□□ -0.39
COL6A2-204ENST00000409416 HSD3B2P26439 372 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 GRPRP30550 384 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 FCHO2Q0JRZ9 810 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 GINS1Q14691 196 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 SEC23BQ15437 767 aa12.63□□□□□ -0.39
COL6A2-204ENST00000409416 MPP7Q5T2T1 576 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms