RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 PTGFRNQ9P2B2 879 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
CHRNA1-204ENST00000409323 LAMA5O15230 3695 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 A0A1W2PQ72 361 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 DYTNA2CJ06 578 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 FXYD1O00168 92 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 WWP2O00308 870 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 PRAMEF2O60811 474 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 F10P00742 488 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 PRDX6P30041 224 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 TRPC1P48995 793 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 CLCN2P51788 898 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 RNF4P78317 190 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 MXRA7P84157 204 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 PRR5P85299 388 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 ART3Q13508 389 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 EXT1Q16394 746 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 RABL3Q5HYI8 236 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 HSDL2Q6YN16 418 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 RINLQ6ZS11 566 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 OLIG3Q7RTU3 272 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 PRR22Q8IZ63 422 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 CLEC1AQ8NC01 280 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 ELP5Q8TE02 316 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 ZFP90Q8TF47 636 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 THAP4Q8WY91 577 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 RAB8BQ92930 207 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 LRRC58Q96CX6 371 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 NSL1Q96IY1 281 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC35G5Q96KT7 338 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 ART5Q96L15 291 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 MS4A4EQ96PG1 132 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 CGREF1Q99674 301 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 DEFB126Q9BYW3 111 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 PIF1Q9H611 641 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 TPT1P8Q9HAU6 139 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 GPATCH2Q9NW75 528 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 PACSIN3Q9UKS6 424 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 ZMIZ1Q9ULJ6 1067 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 HEMK1Q9Y5R4 338 aaPredicted RBP13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 KCNE3Q9Y6H6 103 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.32
CHRNA1-204ENST00000409323 A0A087WV62 115 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 K7ENP7 123 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 CLIC1O00299 241 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 PCDH17O14917 1159 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 ACP2P11117 423 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 RFX3P48380 749 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 EBPQ15125 230 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 TRMT5Q32P41 509 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 LRIF1Q5T3J3 769 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 SAXO2Q658L1 398 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 TCTN3Q6NUS6 607 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 MFSD12Q6NUT3 480 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 INO80CQ6PI98 192 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 NPSR1Q6W5P4 371 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC29A4Q7RTT9 530 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 KBTBD2Q8IY47 623 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 DPP10Q8N608 796 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 TRIML2Q8N7C3 387 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 PCYOX1LQ8NBM8 494 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 SLC16A11Q8NCK7 471 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 OR4N2Q8NGD1 307 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 OR56A1Q8NGH5 318 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 M1APQ8TC57 530 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 PIK3R3Q92569 461 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 NACC2Q96BF6 587 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 IP6K3Q96PC2 410 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 CNTNAP3Q9BZ76 1288 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 SEMA4CQ9C0C4 833 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 WWTR1Q9GZV5 400 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 OR51I1Q9H343 314 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 EPS8L2Q9H6S3 715 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 EFCAB1Q9HAE3 211 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 MMP25Q9NPA2 562 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 ATP13A2Q9NQ11 1180 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 TPRP12270 2363 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 A0A087WV48 116 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 TRBV5-3A0A0A0MS03 114 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 C2orf92A0A1B0GVN3 265 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 GXYLT2A0PJZ3 443 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 TMEM200CA6NKL6 621 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 B2RBV5 119 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 ZNF354AO60765 605 aaPredicted RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 HNRNPCL1O60812 293 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 COQ9O75208 318 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 ERN1O75460 977 aaKnown RBP13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 PSMG1O95456 288 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 NUDT7P0C024 238 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 ETFAP13804 333 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 MATN1P21941 496 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 CRATP43155 626 aa13.07□□□□□ -0.32
CHRNA1-204ENST00000409323 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms