RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 APIPQ96GX9 242 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 WDR6Q9NNW5 1121 aaKnown RBP12.72□□□□□ -0.37
SNED1-205ENST00000405547 BRWD1Q9NSI6 2320 aa12.72□□□□□ -0.37
SNED1-205ENST00000405547 WASHC1A8K0Z3 465 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 ZNF705EA8MWA4 302 aaPredicted RBP12.71□□□□□ -0.37
SNED1-205ENST00000405547 WASH3PC4AMC7 463 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 TAS2R38P59533 333 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 PGM2L1Q6PCE3 622 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 WASH2PQ6VEQ5 465 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 LNX2Q8N448 690 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 ARFGAP1Q8N6T3 406 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 CHPT1Q8WUD6 406 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 NTMT1Q9BV86 223 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 NFKBIEO00221 500 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 RFPL3O75679 317 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 GALTP07902 379 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 RPS15AP62244 130 aaKnown RBP12.71□□□□□ -0.37
SNED1-205ENST00000405547 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.37
SNED1-205ENST00000405547 ASPGQ86U10 573 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 ZNF280BQ86YH2 543 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 HAVCR2Q8TDQ0 301 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.71□□□□□ -0.37
SNED1-205ENST00000405547 CCDC86Q9H6F5 360 aaKnown RBP12.71□□□□□ -0.37
SNED1-205ENST00000405547 RDH14Q9HBH5 336 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 ARNT2Q9HBZ2 717 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 CKAP5Q14008 2032 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 AGXTP21549 392 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 RORAP35398 523 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 SLC9B2Q86UD5 537 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 TP53INP2Q8IXH6 220 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 B3GAT2Q9NPZ5 323 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 A8MUA0 341 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 TEAD2Q15562 447 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 OR8K3Q8NH51 312 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 ZFP90Q8TF47 636 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 RGCCQ9H4X1 137 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 KLRF1Q9NZS2 232 aa12.71□□□□□ -0.37
SNED1-205ENST00000405547 H7C417 338 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 PAK4O96013 591 aaPredicted RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 TFAP2AP05549 437 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 SOX9P48436 509 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 FGFBP1Q14512 234 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 OR4C11Q6IEV9 310 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 ERN2Q76MJ5 926 aaKnown RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 OR9Q2Q8NGE9 314 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 ZNF300Q96RE9 604 aaPredicted RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 TMEM168Q9H0V1 697 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 SYT4Q9H2B2 425 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 KCNK12Q9HB15 430 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 VNN3Q9NY84 501 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 ALS2Q96Q42 1657 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 ICE1Q9Y2F5 2266 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 PHYHO14832 338 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 SPARCP09486 303 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 ZNF41P51814 821 aaPredicted RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 APOFQ13790 326 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 GNMTQ14749 295 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 ZNF648Q5T619 568 aaPredicted RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 MAMDC4Q6UXC1 1216 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 MTHFD2LQ9H903 347 aaPredicted RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 BCORQ6W2J9 1755 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 HYKKA2RU49 373 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 GPR37L1O60883 481 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 NAA10P41227 235 aaPredicted RBP12.71□□□□□ -0.38
SNED1-205ENST00000405547 FOXA1P55317 472 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 COQ10AQ96MF6 247 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 KLHL42Q9P2K6 505 aa12.71□□□□□ -0.38
SNED1-205ENST00000405547 GRXCR1A8MXD5 290 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 ELOAQ14241 798 aaKnown RBP12.7□□□□□ -0.38
SNED1-205ENST00000405547 CATSPEREQ5SY80 951 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 SSX6Q7RTT6 188 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 NAGSQ8N159 534 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.7□□□□□ -0.38
SNED1-205ENST00000405547 NUBP2Q9Y5Y2 271 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 FMO6PO60774 539 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 ALPLP05186 524 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 PRKCAP17252 672 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 PTNP21246 168 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 SOX3P41225 446 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 RGS6P49758 472 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 CYCSP99999 105 aaKnown RBP12.7□□□□□ -0.38
SNED1-205ENST00000405547 SERINC5Q86VE9 423 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 ZFP41Q8N8Y5 198 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 OR7G3Q8NG95 312 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 CD300LFQ8TDQ1 290 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 PMM1Q92871 262 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 SLC6A16Q9GZN6 736 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 BTAF1O14981 1849 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 C2orf74A8MZ97 194 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 FCER2P06734 321 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 IQCF3P0C7M6 154 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 TBCEQ15813 527 aaPredicted RBP12.7□□□□□ -0.38
SNED1-205ENST00000405547 AMZ1Q400G9 498 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 GPAT4Q86UL3 456 aa12.7□□□□□ -0.38
SNED1-205ENST00000405547 TMEM173Q86WV6 379 aaPredicted RBP12.7□□□□□ -0.38
SNED1-205ENST00000405547 TRMT10AQ8TBZ6 339 aaKnown RBP12.7□□□□□ -0.38
SNED1-205ENST00000405547 F2RL3Q96RI0 385 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms