RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FAM114A2Q9NRY5 505 aa3.14□□□□□ -1.91
HMGB1P17-201ENST00000403495 SH3BGRL2Q9UJC5 107 aa3.14□□□□□ -1.91
HMGB1P17-201ENST00000403495 MGAT4BQ9UQ53 548 aa3.14□□□□□ -1.91
HMGB1P17-201ENST00000403495 MOB4Q9Y3A3 225 aa3.14□□□□□ -1.91
HMGB1P17-201ENST00000403495 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.14□□□□□ -1.91
HMGB1P17-201ENST00000403495 AP1M2Q9Y6Q5 423 aa3.14□□□□□ -1.91
HMGB1P17-201ENST00000403495 IGKV3D-15A0A087WSY6 115 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 RNF222A6NCQ9 220 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 ANKRD30BLA7E2S9 258 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 E9PQ18 207 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 PDXKO00764 312 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 EI24O14681 340 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 ARPC1BO15143 372 aaKnown RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 DCXO43602 365 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 VPS26AO75436 327 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 TOM1L1O75674 476 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 ECDO95905 644 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 HEXBP07686 556 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 FCGR3AP08637 254 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 ANXA4P09525 319 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 GSTT2P0CG29 244 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 GSTT2BP0CG30 244 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 LMO2P25791 158 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 CCND2P30279 289 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 NUMBP49757 651 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 VCPP55072 806 aaKnown RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 TRA2BP62995 288 aaKnown RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 HSF2Q03933 536 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 ELAVL2Q12926 359 aaKnown RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 EXOSC2Q13868 293 aaKnown RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 TRIP10Q15642 601 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 PCK2Q16822 640 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 PARP6Q2NL67 630 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 TTC31Q49AM3 519 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 BEND6Q5SZJ8 279 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 C9orf66Q5T8R8 295 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 EMBQ6PCB8 327 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 RFWD3Q6PCD5 774 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 OLFM4Q6UX06 510 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 MOB2Q70IA6 237 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 Q7L0L9 218 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 P4HA3Q7Z4N8 544 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 MISPQ8IVT2 679 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 CERS5Q8N5B7 392 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 TSGA13Q96PP4 275 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 SOSTQ9BQB4 213 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 THUMPD2Q9BTF0 503 aaKnown RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 GPR174Q9BXC1 333 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 RAB11FIP5Q9BXF6 653 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 TRIM15Q9C019 465 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 TUBB1Q9H4B7 451 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 HEXA-AS1Q9H8Q6 139 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 SP140LQ9H930 580 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 GNB4Q9HAV0 340 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 ELL3Q9HB65 397 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 GPR83Q9NYM4 423 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 GTSE1Q9NYZ3 720 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 CGNQ9P2M7 1197 aaKnown RBP3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 RARRES3Q9UL19 164 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 EMCNQ9ULC0 261 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 FOXJ3Q9UPW0 622 aa3.13□□□□□ -1.91
HMGB1P17-201ENST00000403495 IGHV3-16A0A0C4DH30 117 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZSCAN5CA6NGD5 496 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 RNF212BA8MTL3 300 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 MCF2LO15068 1137 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 PHF1O43189 567 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 LRRTM2O43300 516 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 PDE5AO76074 875 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 VENTXO95231 258 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 IGSF6O95976 241 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 PTMAP06454 111 aaKnown RBP3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 GSTA1P08263 222 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 WNT2P09544 360 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 HSD17B1P14061 328 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 PTPN6P29350 595 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 SPRP35270 261 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ADRA1AP35348 466 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 PTGFRP43088 359 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 BRCC3P46736 316 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 SLC7A2P52569 658 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 GSTO1P78417 241 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 NUCB2P80303 420 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 MS4A2Q01362 244 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF85Q03923 595 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF33BQ06732 778 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 RAPSNQ13702 412 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ANKRD55Q3KP44 614 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ACSF3Q4G176 576 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 HSP90AA5PQ58FG0 334 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF841Q6ZN19 808 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ARMCX2Q7L311 632 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 LPCAT2Q7L5N7 544 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ZNF440Q8IYI8 595 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 C4orf32Q8N8J7 132 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 TAF15Q92804 592 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 ATF6BQ99941 703 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 TRIM51Q9BSJ1 452 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 CARD6Q9BX69 1037 aa3.12□□□□□ -1.91
HMGB1P17-201ENST00000403495 TSPY26PQ9H489 355 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms