RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 MC3RP41968 323 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 LHX2P50458 406 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 GFRA1P56159 465 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 PPP2R2BQ00005 443 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 CUL3Q13618 768 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 TMEM81Q6P7N7 255 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 CMC1Q7Z7K0 106 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 NUDT13Q86X67 352 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 OMA1Q96E52 524 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 OR2B2Q9GZK3 357 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 ACBD3Q9H3P7 528 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 TAS2R10Q9NYW0 307 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 KLRF1Q9NZS2 232 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 TRPS1Q9UHF7 1281 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 ADAM21Q9UKJ8 722 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 RNF11Q9Y3C5 154 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 WIF1Q9Y5W5 379 aa13.21□□□□□ -0.29
VAMP1-203ENST00000400911 KIAA1549Q9HCM3 1950 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 A0A1W2PNV4 684 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 TCRBV9S1A1TA0A576 114 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 LRRC14BA6NHZ5 514 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 MSTNO14793 375 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 UGT2B11O75310 529 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 RHOXF2BP0C7M4 288 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 MTHFD2P13995 350 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 CPMP14384 443 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 FPR1P21462 350 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 EEF1A1P68104 462 aaKnown RBP13.2□□□□□ -0.3
VAMP1-203ENST00000400911 CBLBQ13191 982 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 SNTA1Q13424 505 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 C6orf163Q5TEZ5 329 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 EEF1A1P5Q5VTE0 462 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 TBC1D1Q86TI0 1168 aaPredicted RBP13.2□□□□□ -0.3
VAMP1-203ENST00000400911 IFNEQ86WN2 208 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 GRAMD2AQ8IUY3 354 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 CTHRC1Q96CG8 243 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 NXNL1Q96CM4 212 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 REPS1Q96D71 796 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 STARD4Q96DR4 205 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 MED18Q9BUE0 208 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 ZNF226Q9NYT6 803 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 SNX24Q9Y343 169 aa13.2□□□□□ -0.3
VAMP1-203ENST00000400911 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 EFCAB8A8MWE9 144 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 FOXE1O00358 373 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 KLK1P06870 262 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 LTA4HP09960 611 aaKnown RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PORP16435 677 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 TCEA1P23193 301 aaKnown RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 CHMP24386 653 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 SPRP35270 261 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PIK3CGP48736 1102 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 MGAT2Q10469 447 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 EXOSC7Q15024 291 aaKnown RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PFKFB4Q16877 469 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 VWA1Q6PCB0 445 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 AAGABQ6PD74 315 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 ZNF474Q6S9Z5 364 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 FAM111BQ6SJ93 734 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 SCIMPQ6UWF3 145 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 C3orf62Q6ZUJ4 267 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PLCZ1Q86YW0 608 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 CTAGE3PQ8IX95 158 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 CNEP1R1Q8N9A8 125 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PPP1R14CQ8TAE6 165 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 WDR20Q8TBZ3 569 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 LCORQ96JN0 433 aaPredicted RBP13.19□□□□□ -0.3
VAMP1-203ENST00000400911 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PIGQQ9BRB3 760 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 ITPAQ9BY32 194 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 BRINP2Q9C0B6 783 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 IPPKQ9H8X2 491 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 SAYSD1Q9NPB0 183 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 FBXL2Q9UKC9 423 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 MPDZO75970 2070 aa13.19□□□□□ -0.3
VAMP1-203ENST00000400911 PRAMEF25A6NGN4 478 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 ACOX3O15254 700 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 UGDHO60701 494 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 CNOT4O95628 575 aaKnown RBP13.18□□□□□ -0.3
VAMP1-203ENST00000400911 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
VAMP1-203ENST00000400911 CRYGSP22914 178 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 CRABP2P29373 138 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 UGT2B10P36537 528 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 FEN1P39748 380 aaKnown RBP13.18□□□□□ -0.3
VAMP1-203ENST00000400911 CD79BP40259 229 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 CLDN18P56856 261 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 MRPS25P82663 173 aaKnown RBP13.18□□□□□ -0.3
VAMP1-203ENST00000400911 HMGCS1Q01581 520 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 GTF2H2Q13888 395 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 PRICKLE4Q2TBC4 344 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 GRTP1Q5TC63 336 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 OR5M10Q6IEU7 315 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 GTF2H2CQ6P1K8 395 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 CYS1Q717R9 158 aa13.18□□□□□ -0.3
VAMP1-203ENST00000400911 P4HA3Q7Z4N8 544 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms