RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TMX2-CTNND1H3BSU7 103 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GABRG2P18507 467 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 TARDBPQ13148 414 aaKnown RBP eCLIP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 CCINQ13939 588 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SEC23BQ15437 767 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C16orf87Q6PH81 154 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 Q6ZNX1 250 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 C16orf62Q7Z3J2 963 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC46A3Q7Z3Q1 461 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC44A3Q8N4M1 653 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 FAM26EQ8N5C1 309 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 AVL9Q8NBF6 648 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 KCT2Q8NC54 265 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 B3GNT7Q8NFL0 401 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 VANGL1Q8TAA9 524 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 ARHGDIGQ99819 225 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 MACROD1Q9BQ69 325 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 RSPO3Q9BXY4 272 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 DAPP1Q9UN19 280 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 SLC22A7Q9Y694 548 aa16.65■□□□□ 0.26
HLA-DQB1-204ENST00000399084 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 A0A087WV62 115 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 IRGMA1A4Y4 181 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SNTNA6NMZ2 147 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 AIREO43918 545 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RPLP0P05388 317 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 LCKP06239 509 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 HOXB3P14651 431 aaPredicted RBP16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MAGP20916 626 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 C21orf33P30042 268 aaPredicted RBP16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CLK1P49759 484 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 BLKP51451 505 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 FUT5Q11128 374 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ST3GAL3Q11203 375 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ZNF311Q5JNZ3 666 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PODNL1Q6PEZ8 512 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 USP43Q70EL4 1123 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR2L13Q8N349 312 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR4D11Q8NGI4 311 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 KLHL6Q8WZ60 621 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ZHX1-C8orf76Q96EF9 292 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GIMAP5Q96F15 307 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 POLDIP3Q9BY77 421 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PRRG3Q9BZD7 231 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SLC38A1Q9H2H9 487 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MMP27Q9H306 513 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 KCNK12Q9HB15 430 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GPR83Q9NYM4 423 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CD207Q9UJ71 328 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MKLN1Q9UL63 735 aa16.64■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR6C74A6NCV1 312 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 H0Y8X5 98 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CBFA2T3O75081 653 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 STSP08842 583 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ALOX12P18054 663 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ALDH4A1P30038 563 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MC3RP41968 323 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 DGKEP52429 567 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 UBE2IP63279 158 aaKnown RBP16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RHAGQ02094 409 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PIN1Q13526 163 aaPredicted RBP16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GPR18Q14330 331 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TRAM2Q15035 370 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 INAVAQ3KP66 663 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TPRG1LQ5T0D9 272 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 KIAA0895LQ68EN5 471 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 FCRL6Q6DN72 434 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MFSD12Q6NUT3 480 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ADCK1Q86TW2 530 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 AMER2Q8N7J2 671 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 KBTBD8Q8NFY9 601 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR4K5Q8NGD3 323 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR6T1Q8NGN1 323 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OR9A2Q8NGT5 310 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 BAHD1Q8TBE0 780 aaPredicted RBP16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GNPDA2Q8TDQ7 276 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RHNO1Q9BSD3 238 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CPNE7Q9UBL6 633 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 OSGIN1Q9UJX0 560 aa16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MDC1Q14676 2089 aaKnown RBP16.63■□□□□ 0.25
HLA-DQB1-204ENST00000399084 A0A0J9YY10 115 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 WASHC1A8K0Z3 465 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 H3BN98 237 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 M0R082 166 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PRKRAO75569 313 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 NADKO95544 446 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 AK1P00568 194 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ADORA3P0DMS8 318 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 PORP16435 677 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 POU1F1P28069 291 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 ARHGAP11BQ3KRB8 267 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 NIPAL1Q6NVV3 410 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 GDPGP1Q6ZNW5 385 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 RNF44Q7L0R7 432 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SLC15A4Q8N697 577 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 MORN4Q8NDC4 146 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 CCL4L1Q8NHW4 92 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 TEX12Q9BXU0 123 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 SIAEQ9HAT2 523 aa16.62■□□□□ 0.25
HLA-DQB1-204ENST00000399084 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms