RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 THAP6Q8TBB0 222 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 OSBPL7Q9BZF2 842 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 GOLGA4Q13439 2230 aaKnown RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 ATF6P18850 670 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 FDXRP22570 491 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 UGT8Q16880 541 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 TIMMDC1Q9NPL8 285 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 PCDHB10Q9UN67 800 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 GPR52Q9Y2T5 361 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 FGF3P11487 239 aaPredicted RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 ADAMTS18Q8TE60 1221 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 SECISBP2Q96T21 854 aaKnown RBP10.79□□□□□ -0.68
TTC28-201ENST00000397906 C2orf42Q9NWW7 574 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 MED11Q9P086 117 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 PIGFQ07326 219 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 OR7A5Q15622 319 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 FAM189A2Q15884 450 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 CDKL4Q5MAI5 379 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 VHLLQ6RSH7 139 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 TMPRSS12Q86WS5 348 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 TWSG1Q9GZX9 223 aa10.79□□□□□ -0.68
TTC28-201ENST00000397906 MDGA1Q8NFP4 955 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 OR52N2Q8NGI0 321 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 RHEBL1Q8TAI7 183 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 C9orf43Q8TAL5 461 aaPredicted RBP10.78□□□□□ -0.68
TTC28-201ENST00000397906 FKBP14Q9NWM8 211 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 TAAR2Q9P1P5 351 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ZNF487B1APH4 448 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 DISC1C4P0D8 188 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 IFNGR1P15260 489 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 XKRXQ6PP77 449 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 RDH12Q96NR8 316 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 CMAHPQ9Y471 501 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 LOC102723532A0A0G2JNH3 316 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 PNMTP11086 282 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 E2F1Q01094 437 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 SQSTM1Q13501 440 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 HSD17B12Q53GQ0 312 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GLT8D1Q68CQ7 371 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 MAMDC2Q7Z304 686 aaPredicted RBP10.78□□□□□ -0.68
TTC28-201ENST00000397906 CTRCQ99895 268 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 FUZQ9BT04 418 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 SLC22A4Q9H015 551 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ERVK-19Q9WJR5 959 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 CCL26Q9Y258 94 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 IGKV6-21A0A0C4DH24 114 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 KLHL33A6NCF5 533 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 M0R129 80 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GPR39O43194 453 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GKN3PP0CG01 181 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GSTM4Q03013 218 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 PDZD3Q86UT5 571 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ZNF709Q8N972 641 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 OR5D16Q8NGK9 328 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ADAMTS19Q8TE59 1207 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 KLF16Q9BXK1 252 aaPredicted RBP10.78□□□□□ -0.68
TTC28-201ENST00000397906 ACTRT3Q9BYD9 372 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 EURLQ9NYK6 297 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 TAS2R10Q9NYW0 307 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 RFPL1O75677 317 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 NPPAP01160 153 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 DCAF12Q5T6F0 453 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 PLEKHG7Q6ZR37 379 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ARL14Q8N4G2 192 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 F5H5K5 113 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 MARCH8Q5T0T0 291 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 C10orf62Q5T681 223 aaPredicted RBP10.78□□□□□ -0.68
TTC28-201ENST00000397906 TIFABQ6ZNK6 161 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 SAMD12Q8N8I0 201 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 RCBTB1Q8NDN9 531 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ASB12Q8WXK4 309 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 APIPQ96GX9 242 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 NUDT15Q9NV35 164 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 LIPT1Q9Y234 373 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 NUP98P52948 1817 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 MICAL3Q7RTP6 2002 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 SLC22A1O15245 554 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GTF2F2P13984 249 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ENDOUP21128 410 aaKnown RBP10.78□□□□□ -0.68
TTC28-201ENST00000397906 PROZP22891 400 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 APOFQ13790 326 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 CDNFQ49AH0 187 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 SHQ1Q6PI26 577 aaKnown RBP10.78□□□□□ -0.68
TTC28-201ENST00000397906 OR6C1Q96RD1 312 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 SLC7A7Q9UM01 511 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 TRAV6A0A075B6T7 132 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 RAD1O60671 282 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GCH1P30793 250 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GJA4P35212 333 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 HTR3DQ70Z44 454 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 OR51L1Q8NGJ5 315 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 ACTR6Q9GZN1 396 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GAREM1Q9H706 876 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 NSG1A0A0A6YYJ2 146 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 F8A1P23610 371 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 DNAJB1P25685 340 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 MAT1AQ00266 395 aaKnown RBP10.78□□□□□ -0.68
TTC28-201ENST00000397906 MANEALQ5VSG8 457 aa10.78□□□□□ -0.68
TTC28-201ENST00000397906 GPN2Q9H9Y4 310 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms