RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 BBIP1A8MTZ0 92 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ETV2O00321 342 aaPredicted RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 FCHO1O14526 889 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ACOX3O15254 700 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 GCM2O75603 506 aaPredicted RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 UQCRC2P22695 453 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 CDC73Q6P1J9 531 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 EXOSC8Q96B26 276 aaKnown RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 MS4A4EQ96PG1 132 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 LPAR4Q99677 370 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 DUSP22Q9NRW4 184 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 TRIM33Q9UPN9 1127 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ERVK-19Q9WJR5 959 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 PCDHB14Q9Y5E9 798 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 HRH3Q9Y5N1 445 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 A0A0G2JND7 137 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 A0A1W2PRB8 838 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 LCN1P31025 176 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 NCBP2P52298 156 aaKnown RBP eCLIP9.79□□□□□ -0.84
NUP98-205ENST00000397007 RRADP55042 308 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 Q6ZS92 163 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 FAM71CQ8NEG0 241 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 OR52R1Q8NGF1 315 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 BRIX1Q8TDN6 353 aaKnown RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 VPS33AQ96AX1 596 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ART5Q96L15 291 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ELAC2Q9BQ52 826 aaKnown RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 IL1RL2Q9HB29 575 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 PSME2Q9UL46 239 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ZNF780BQ9Y6R6 833 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 EMC8O43402 210 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 PRAMEF2O60811 474 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 VIMP08670 466 aaKnown RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 COX7A2P14406 83 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 OTX2P32243 289 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ARL1P40616 181 aaPredicted RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 PPM1FP49593 454 aaPredicted RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 RHDQ02161 417 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 ACTN3Q08043 901 aaPredicted RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 COL28A1Q2UY09 1125 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 BROXQ5VW32 411 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 TCTN3Q6NUS6 607 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 TMEM107Q6UX40 140 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 GK5Q6ZS86 529 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 GFM2Q969S9 779 aaKnown RBP9.79□□□□□ -0.84
NUP98-205ENST00000397007 SPDL1Q96EA4 605 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 RASL10BQ96S79 203 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 RABEP2Q9H5N1 569 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 VAPAQ9P0L0 249 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 CHST2Q9Y4C5 530 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 SHANK1Q9Y566 2161 aa9.79□□□□□ -0.84
NUP98-205ENST00000397007 HMGN4O00479 90 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 FZD7O75084 574 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 PTGER1P34995 402 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 DCAF7P61962 342 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 MRPS35P82673 323 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 TUBA3CQ13748 450 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 TUBA3EQ6PEY2 450 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 SLC2A7Q6PXP3 512 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 RP9Q8TA86 221 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 HSPBAP1Q96EW2 488 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 THOC1Q96FV9 657 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 SECISBP2Q96T21 854 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 ATXN7O15265 892 aaPredicted RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 FADS1O60427 444 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 GLSO94925 669 aaPredicted RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 PIGAP37287 484 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 AP2B1P63010 937 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 STX4Q12846 297 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 EXOSC7Q15024 291 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 MINDY4Q4G0A6 757 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 PAQR8Q8TEZ7 354 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 APOBEC4Q8WW27 367 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 ITPAQ9BY32 194 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 WDR41Q9HAD4 459 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 ATP13A2Q9NQ11 1180 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 KCNE5Q9UJ90 142 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 MYOCOSA0A1B0GUC4 107 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 AKAP10O43572 662 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 CLCN2P51788 898 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 PCBP3P57721 371 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 MTDHQ86UE4 582 aaKnown RBP9.78□□□□□ -0.84
NUP98-205ENST00000397007 PTOV1Q86YD1 416 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 ADCY4Q8NFM4 1077 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 METTL21AQ8WXB1 218 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 MFRPQ9BY79 579 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 ZNF350Q9GZX5 532 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 TMEM38AQ9H6F2 299 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 KCNE3Q9Y6H6 103 aa9.78□□□□□ -0.84
NUP98-205ENST00000397007 UBR5O95071 2799 aaPredicted RBP9.77□□□□□ -0.84
NUP98-205ENST00000397007 C9JVG2 144 aa9.77□□□□□ -0.84
NUP98-205ENST00000397007 ERN1O75460 977 aaKnown RBP9.77□□□□□ -0.84
NUP98-205ENST00000397007 ERAL1O75616 437 aaKnown RBP9.77□□□□□ -0.84
NUP98-205ENST00000397007 TFPTP0C1Z6 253 aa9.77□□□□□ -0.84
NUP98-205ENST00000397007 NID1P14543 1247 aa9.77□□□□□ -0.84
NUP98-205ENST00000397007 FOXO1Q12778 655 aa9.77□□□□□ -0.84
NUP98-205ENST00000397007 GOLM1Q8NBJ4 401 aa9.77□□□□□ -0.84
NUP98-205ENST00000397007 PIGUQ9H490 435 aa9.77□□□□□ -0.84
NUP98-205ENST00000397007 A4GALTQ9NPC4 353 aa9.77□□□□□ -0.84
NUP98-205ENST00000397007 MIEF1Q9NQG6 463 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms