RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 HIDE1A8MVS5 230 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 NR2F6P10588 404 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 PTGER1P34995 402 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 KIR2DL3P43628 341 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 ST8SIA6P61647 398 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 GPR19Q15760 415 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 C9orf64Q5T6V5 341 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 OTUB2Q96DC9 234 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 C1GALT1C1Q96EU7 318 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 LRRC3BQ96PB8 259 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 FYTTD1Q96QD9 318 aaKnown RBP14.8□□□□□ -0.04
HOXA3-202ENST00000396352 BCL2L10Q9HD36 194 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 ISYNA1Q9NPH2 558 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 PAK6Q9NQU5 681 aaPredicted RBP14.8□□□□□ -0.04
HOXA3-202ENST00000396352 TM7SF3Q9NS93 570 aa14.8□□□□□ -0.04
HOXA3-202ENST00000396352 ZCCHC3Q9NUD5 404 aaKnown RBP14.8□□□□□ -0.04
HOXA3-202ENST00000396352 NUFIP1Q9UHK0 495 aaKnown RBP14.8□□□□□ -0.04
HOXA3-202ENST00000396352 LCMT2O60294 686 aaKnown RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 LIMS3P0CW19 117 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 LIMS4P0CW20 117 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 PPP2R1BP30154 601 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SLC6A11P48066 632 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 RPA4Q13156 261 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 GPAT3Q53EU6 434 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 CD200R1LQ6Q8B3 271 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SLC36A4Q6YBV0 504 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 VASH1Q7L8A9 365 aaPredicted RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 BBS10Q8TAM1 723 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SLC9A6Q92581 669 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 DEPDC7Q96QD5 511 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 DPH7Q9BTV6 452 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 ADAM29Q9UKF5 820 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 NDRG2Q9UN36 371 aaKnown RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 KIAA0355O15063 1070 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 PRKRAO75569 313 aaKnown RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 MYL9P24844 172 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 GABRA5P31644 462 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 CAV3P56539 151 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 MADCAM1Q13477 382 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 CRTC2Q53ET0 693 aaPredicted RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 PYDC2Q56P42 97 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 NDUFAF5Q5TEU4 345 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SHFQ7M4L6 423 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 AMZ2Q86W34 360 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 COX14Q96I36 57 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SAP130Q9H0E3 1048 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 NT5DC2Q9H857 520 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 RNF121Q9H920 327 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 TOR4AQ9NXH8 423 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 PAQR5Q9NXK6 330 aaPredicted RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 A0A087WUU8 490 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 PRRT4C9JH25 899 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SLC30A4O14863 429 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 OR1F1O43749 312 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 FGF19O95750 216 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 CSF2P04141 144 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 GSTM3P21266 225 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 FGF9P31371 208 aaPredicted RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 MTNR1AP48039 350 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 ERVFC1P60507 584 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 MINDY4Q4G0A6 757 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 OR4C11Q6IEV9 310 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 ZNF793Q6ZN11 406 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 ERN2Q76MJ5 926 aaKnown RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 CAMKK1Q8N5S9 505 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SIMC1Q8NDZ2 872 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 TMIEQ8NEW7 156 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 ATP6V1C2Q8NEY4 427 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 TOX2Q96NM4 488 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 DCLRE1CQ96SD1 692 aaKnown RBP14.79□□□□□ -0.04
HOXA3-202ENST00000396352 TMEM246Q9BRR3 403 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 ARHGAP9Q9BRR9 750 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 ANKRA2Q9H9E1 313 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 WDR70Q9NW82 654 aa14.79□□□□□ -0.04
HOXA3-202ENST00000396352 SOX18P35713 384 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 KHKP50053 298 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 UBE3AQ05086 875 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 LINC01555Q8NAE3 123 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 UFD1Q92890 307 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 SOSTQ9BQB4 213 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 YIPF4Q9BSR8 244 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 PRR14Q9BWN1 585 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 QRSL1Q9H0R6 528 aaKnown RBP14.78□□□□□ -0.04
HOXA3-202ENST00000396352 KDM4EB2RXH2 506 aaPredicted RBP14.78□□□□□ -0.04
HOXA3-202ENST00000396352 GUCY1B2O75343 617 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 UBXN7O94888 489 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 NTN1O95631 604 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 LALBAP00709 142 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 HLA-DQB1P01920 261 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 ADH5P11766 374 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 BUD31P41223 144 aaPredicted RBP14.78□□□□□ -0.04
HOXA3-202ENST00000396352 MLLT3P42568 568 aaPredicted RBP14.78□□□□□ -0.04
HOXA3-202ENST00000396352 NCBP2P52298 156 aaKnown RBP eCLIP14.78□□□□□ -0.04
HOXA3-202ENST00000396352 Q5BKY6 102 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 SLC27A4Q6P1M0 643 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 NOXA1Q86UR1 476 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 UBE2J2Q8N2K1 259 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 ZFP41Q8N8Y5 198 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 AP3S1Q92572 193 aa14.78□□□□□ -0.04
HOXA3-202ENST00000396352 FRMD6Q96NE9 622 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms