RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 PRDX6P30041 224 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 FHITP49789 147 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 LIMK2P53671 638 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 SLC26A5P58743 744 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 DHODHQ02127 395 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 EXOSC7Q15024 291 aaKnown RBP4.79□□□□□ -1.64
CDKN3-203ENST00000395577 RFTN2Q52LD8 501 aaPredicted RBP4.79□□□□□ -1.64
CDKN3-203ENST00000395577 WLSQ5T9L3 541 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 IRGCQ6NXR0 463 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 Q6ZRP5 223 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 CDHR3Q6ZTQ4 885 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 ADGRD2Q7Z7M1 963 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 CUZD1Q86UP6 607 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 WDR49Q8IV35 697 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 CFAP53Q96M91 514 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 C16orf45Q96MC5 204 aaPredicted RBP4.79□□□□□ -1.64
CDKN3-203ENST00000395577 ZNF300Q96RE9 604 aaPredicted RBP4.79□□□□□ -1.64
CDKN3-203ENST00000395577 HPS4Q9NQG7 708 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 GDF3Q9NR23 364 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 SPHK2Q9NRA0 654 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 VPS54Q9P1Q0 977 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 ERVK-18Q9QC07 812 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 EPS15L1Q9UBC2 864 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 KLK11Q9UBX7 282 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 DIMT1Q9UNQ2 313 aaKnown RBP4.79□□□□□ -1.64
CDKN3-203ENST00000395577 CHD9Q3L8U1 2897 aa4.79□□□□□ -1.64
CDKN3-203ENST00000395577 BDP1A6H8Y1 2624 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 ATP8B3O60423 1300 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 FAM205AQ6ZU69 1335 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 PIEZO1Q92508 2521 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 COL2A1P02458 1487 aaPredicted RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 A8MU76 341 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 TLX2O43763 284 aaPredicted RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 KIAA0513O60268 411 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 CSO75390 466 aaKnown RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 MTRF1O75570 445 aaKnown RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 GNSP15586 552 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 EDNRAP25101 427 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 ACADSBP45954 432 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 NLRP11P59045 1033 aaKnown RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 CEBPEQ15744 281 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 FAM189A2Q15884 450 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 FASTKD1Q53R41 847 aaKnown RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 CDC42EP5Q6NZY7 148 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 ARHGAP11AQ6P4F7 1023 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 UNC5DQ6UXZ4 953 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 TMEM26Q6ZUK4 368 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 PARP8Q8N3A8 854 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 LRRC17Q8N6Y2 441 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 U2AF1L4Q8WU68 220 aaKnown RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 LIPHQ8WWY8 451 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 RAB40CQ96S21 281 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 JPH2Q9BR39 696 aaPredicted RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 RWDD1Q9H446 243 aaPredicted RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 TMEM231Q9H6L2 316 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 MED20Q9H944 212 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 LIN28AQ9H9Z2 209 aaKnown RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 FGF22Q9HCT0 170 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 B3GAT2Q9NPZ5 323 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 NLGN3Q9NZ94 848 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 CNOT2Q9NZN8 540 aaKnown RBP4.78□□□□□ -1.64
CDKN3-203ENST00000395577 AURKCQ9UQB9 309 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 LRP12Q9Y561 859 aa4.78□□□□□ -1.64
CDKN3-203ENST00000395577 IQCMA0A1B0GVH7 501 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 GRID2O43424 1007 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 AKR7A3O95154 331 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 APRTP07741 180 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 HIST1H2AGP0C0S8 130 aaPredicted RBP4.77□□□□□ -1.65
CDKN3-203ENST00000395577 ZNF26P17031 533 aaPredicted RBP4.77□□□□□ -1.65
CDKN3-203ENST00000395577 PRKACGP22612 351 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 DNAJB1P25685 340 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 CCND2P30279 289 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 PKLRP30613 574 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 NUMBP49757 651 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 RBBP4Q09028 425 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 SPP2Q13103 211 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 GCKRQ14397 625 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 LIPJQ5W064 366 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 ZNF730Q6ZMV8 503 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 USP43Q70EL4 1123 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 SYVN1Q86TM6 617 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.77□□□□□ -1.65
CDKN3-203ENST00000395577 APOBEC3FQ8IUX4 373 aaKnown RBP4.77□□□□□ -1.65
CDKN3-203ENST00000395577 RNF148Q8N7C7 305 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 OR56B1Q8NGI3 324 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 ZNF519Q8TB69 540 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 GOLGA5Q8TBA6 731 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 CCDC110Q8TBZ0 833 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 TCP11Q8WWU5 503 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 HIST1H2ACQ93077 130 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 MRPL24Q96A35 216 aaKnown RBP4.77□□□□□ -1.65
CDKN3-203ENST00000395577 USP28Q96RU2 1077 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 KRT12Q99456 494 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 LITAFQ99732 161 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 SYT15Q9BQS2 421 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 OVOL2Q9BRP0 275 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 CBWD1Q9BRT8 395 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 PINK1Q9BXM7 581 aa4.77□□□□□ -1.65
CDKN3-203ENST00000395577 COA1Q9GZY4 146 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms