RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 IGFBP7Q16270 282 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 OR4F3Q6IEY1 312 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 NPSR1Q6W5P4 371 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 WDR53Q7Z5U6 358 aaPredicted RBP18.38■□□□□ 0.53
SNCA-203ENST00000394986 TAGAPQ8N103 731 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 CEP70Q8NHQ1 597 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 TP53INP1Q96A56 240 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 TMEM125Q96AQ2 219 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 VSTM2LQ96N03 204 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 PRPF18Q99633 342 aaKnown RBP18.38■□□□□ 0.53
SNCA-203ENST00000394986 ATAD3AQ9NVI7 634 aa18.38■□□□□ 0.53
SNCA-203ENST00000394986 E9PBE3 544 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 G3V3Y1 287 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 DYNC1I1O14576 645 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 NME2P1O60361 137 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 BCAS2O75934 225 aaPredicted RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 SLITRK5O94991 958 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 C6orf47O95873 294 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 FBXO45P0C2W1 286 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 PLA2G2AP14555 144 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 DDX5P17844 614 aaKnown RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 NME2P22392 152 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 IL12AP29459 219 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 GPR85P60893 370 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 ZNF791Q3KP31 576 aaPredicted RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 ACAD11Q709F0 780 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 SZRD1Q7Z422 152 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 CAMKMTQ7Z624 323 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 OR5M3Q8NGP4 307 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 GRHL3Q8TE85 626 aa18.37■□□□□ 0.53
SNCA-203ENST00000394986 SPACA9Q96E40 222 aaPredicted RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 LCORQ96JN0 433 aaPredicted RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 BHLHE41Q9C0J9 482 aaPredicted RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 SIRT3Q9NTG7 399 aaPredicted RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 COPG1Q9Y678 874 aaKnown RBP18.37■□□□□ 0.53
SNCA-203ENST00000394986 A0A0G2JMM0 328 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 A0A1W2PPB8 328 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 A0A1W2PRS3 328 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 KIR3DP1A8MWS1 328 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 CDK2AP1O14519 115 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 POLR3GO15318 223 aaPredicted RBP18.36■□□□□ 0.53
SNCA-203ENST00000394986 COQ9O75208 318 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 RASAL1O95294 804 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 TGDSO95455 350 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 PSMG1O95456 288 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 CCL3P10147 92 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 PRKAG1P54619 331 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 WNT3P56703 355 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 SPANXN4Q5MJ08 99 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 RPUSD3Q6P087 351 aaKnown RBP18.36■□□□□ 0.53
SNCA-203ENST00000394986 GPALPP1Q8IXQ4 340 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 CLECL1Q8IZS7 167 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 SLC15A4Q8N697 577 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 TMEM178AQ8NBL3 297 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 PSD4Q8NDX1 1056 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 C17orf47Q8NEP4 570 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 OR10G3Q8NGC4 313 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 RFWD2Q8NHY2 731 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 CLMPQ9H6B4 373 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 CXorf36Q9H7Y0 433 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 NPHS2Q9NP85 383 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 TIMMDC1Q9NPL8 285 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 EQTNQ9NQ60 294 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 TCF7L2Q9NQB0 619 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 TAS2R9Q9NYW1 312 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 GPR55Q9Y2T6 319 aaPredicted RBP18.36■□□□□ 0.53
SNCA-203ENST00000394986 NPFFR2Q9Y5X5 522 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 CROCCQ5TZA2 2017 aa18.36■□□□□ 0.53
SNCA-203ENST00000394986 UBDO15205 165 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 ERN1O75460 977 aaKnown RBP18.35■□□□□ 0.53
SNCA-203ENST00000394986 ABCB1P08183 1280 aaPredicted RBP18.35■□□□□ 0.53
SNCA-203ENST00000394986 CT45A8P0DMV1 189 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 CT45A9P0DMV2 189 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 ABCD3P28288 659 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 PPICP45877 212 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 CLNS1AP54105 237 aaKnown RBP18.35■□□□□ 0.53
SNCA-203ENST00000394986 FBXW4P57775 412 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 PHC1P78364 1004 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 MLC1Q15049 377 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 CT45A2Q5DJT8 189 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 DESI1Q6ICB0 168 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 RTL4Q6ZR62 310 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.35■□□□□ 0.53
SNCA-203ENST00000394986 ANKRD46Q86W74 232 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 CPSF7Q8N684 471 aaKnown RBP18.35■□□□□ 0.53
SNCA-203ENST00000394986 FAM13CQ8NE31 585 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 OR5P2Q8WZ92 322 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 MIB2Q96AX9 1013 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 TESCQ96BS2 214 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 BTBD9Q96Q07 612 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 DEPPQ9NTK1 212 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 DCTN4Q9UJW0 460 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 PCDHGB6Q9Y5F9 930 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 SNX8Q9Y5X2 465 aa18.35■□□□□ 0.53
SNCA-203ENST00000394986 PINLYPA6NC86 204 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 FRG2CA6NGY1 282 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 IDO1P14902 403 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 RFC3P40938 356 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 KIR3DL1P43629 444 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 DGKQP52824 942 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms