RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 GNRHR2Q96P88 292 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 DOHHQ9BU89 302 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 EBPLQ9BY08 206 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 SHCBP1LQ9BZQ2 653 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 BRINP2Q9C0B6 783 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 SLC24A3Q9HC58 644 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 GALNT9Q9HCQ5 603 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.1□□□□□ -1.11
ATG4A-205ENST00000394892 SIRT5Q9NXA8 310 aa8.1□□□□□ -1.11
ATG4A-205ENST00000394892 GPR55Q9Y2T6 319 aaPredicted RBP8.1□□□□□ -1.11
ATG4A-205ENST00000394892 SMIM23A6NLE4 172 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 ACOT7O00154 380 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 BCKDKO14874 412 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 TO15178 435 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 DYRK3O43781 588 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 PCDH7O60245 1069 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 PPM1BO75688 479 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 KRT6AP02538 564 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 KRT6BP04259 564 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 HPNP05981 417 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 ENO1P06733 434 aaKnown RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 CSNK2A2P19784 350 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 TACR1P25103 407 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 PTPN6P29350 595 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 CHRNB4P30926 498 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 TIA1P31483 386 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 CRHR1P34998 444 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 KRT6CP48668 564 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 ALDH9A1P49189 494 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 MAN2A2P49641 1150 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 CDK9P50750 372 aaKnown RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 PKNOX1P55347 436 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 CORO7P57737 925 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 DNAJB13P59910 316 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 BTKQ06187 659 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 KIAA0040Q15053 153 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 EIPR1Q53HC9 387 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 FAM71E1Q6IPT2 247 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 Q6ZSR9 355 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 FRMD7Q6ZUT3 714 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 TRIM46Q7Z4K8 759 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 SLC22A9Q8IVM8 553 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 ULK2Q8IYT8 1036 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 DND1Q8IYX4 353 aaKnown RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 TAGAPQ8N103 731 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 C4orf33Q8N1A6 199 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 GBP7Q8N8V2 638 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 EIF1ADQ8N9N8 165 aaKnown RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 WDSUB1Q8N9V3 476 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 OR7G2Q8NG99 324 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 OR4N2Q8NGD1 307 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 OR2T11Q8NH01 316 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 NEIL3Q8TAT5 605 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 ZNF675Q8TD23 568 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 RND1Q92730 232 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 EXOSC8Q96B26 276 aaKnown RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 OMA1Q96E52 524 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 EGLN2Q96KS0 407 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 JSRP1Q96MG2 331 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 VSTM2LQ96N03 204 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 TIMP4Q99727 224 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 GATA5Q9BWX5 397 aaPredicted RBP8.09□□□□□ -1.11
ATG4A-205ENST00000394892 RTN4RQ9BZR6 473 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 TUBB1Q9H4B7 451 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 MID1IP1Q9NPA3 183 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 OXSMQ9NWU1 459 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 DCDC2Q9UHG0 476 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 UTS2RQ9UKP6 389 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 ACAD8Q9UKU7 415 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 C15orf41Q9Y2V0 281 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 SLC6A5Q9Y345 797 aa8.09□□□□□ -1.11
ATG4A-205ENST00000394892 MYO1GB0I1T2 1018 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 NPIPB8E9PQR5 432 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 GNB5O14775 395 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 TSPAN2O60636 221 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 DIAPH2O60879 1101 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 ICOSLGO75144 302 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 GLRA3O75311 464 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 PSMG1O95456 288 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 ANXA4P09525 319 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 MYL2P10916 166 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 CD99P14209 185 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 DRD2P14416 443 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 CREB1P16220 341 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 NAGAP17050 411 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 DRD5P21918 477 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 MSX1P28360 303 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 HMOX2P30519 316 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 DEKP35659 375 aaKnown RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 PPICP45877 212 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 ART1P52961 327 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 GAS1P54826 345 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 VSNL1P62760 191 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 SNTB1Q13884 538 aaKnown RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 PCLAFQ15004 111 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 WIPI1Q5MNZ9 446 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 C1orf185Q5T7R7 199 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 CES4AQ5XG92 561 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 TIGD3Q6B0B8 471 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms