RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TRAM2Q15035 370 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 NDUFA9Q16795 377 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 PGBD3Q8N328 593 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 CAMK1GQ96NX5 476 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 OPALINQ96PE5 141 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 LYSMD1Q96S90 227 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 KCNN2Q9H2S1 579 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 TMPRSS11EQ9UL52 423 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 ABHD14A-ACY1A0A1B0GW23 586 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 HTR3AP46098 478 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 FAM71E1Q6IPT2 247 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 FGD2Q7Z6J4 655 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 PHC2Q8IXK0 858 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 C12orf76Q8N812 135 aaPredicted RBP15.26■□□□□ 0.03
PCDH1-203ENST00000394536 SLAIN1Q8ND83 568 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 OR4E2Q8NGC2 313 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 OR6T1Q8NGN1 323 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 MCCC1Q96RQ3 725 aaPredicted RBP15.26■□□□□ 0.03
PCDH1-203ENST00000394536 CCDC3Q9BQI4 270 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 IGFLR1Q9H665 355 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 MVB12BQ9H7P6 319 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 IL21Q9HBE4 155 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 PHPT1Q9NRX4 125 aaPredicted RBP15.26■□□□□ 0.03
PCDH1-203ENST00000394536 MYOFQ9NZM1 2061 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 IGLON5A6NGN9 336 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 SMLR1H3BR10 107 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 PPM1DO15297 605 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 LRRTM2O43300 516 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 RHAGQ02094 409 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 SEC23BQ15437 767 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 ACSM5Q6NUN0 579 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 XKRXQ6PP77 449 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 IL20RBQ6UXL0 311 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 GDPGP1Q6ZNW5 385 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 LCN9Q8WX39 176 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 C16orf58Q96GQ5 468 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 TM7SF3Q9NS93 570 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 DKK3Q9UBP4 350 aa15.26■□□□□ 0.03
PCDH1-203ENST00000394536 LIM2P55344 173 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 ILKQ13418 452 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 DSG2Q14126 1118 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 ANGPT1Q15389 498 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 DHCR24Q15392 516 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 TOR1AIP1Q5JTV8 583 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 CPOQ8IVL8 374 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 METTL2AQ96IZ6 378 aaKnown RBP15.25■□□□□ 0.03
PCDH1-203ENST00000394536 WDR45Q9Y484 360 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 OR52A4PA6NMU1 304 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 SLC7A9P82251 487 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 CDC20Q12834 499 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 ADAM15Q13444 863 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 PRPF38BQ5VTL8 546 aaKnown RBP15.25■□□□□ 0.03
PCDH1-203ENST00000394536 FCRLBQ6BAA4 426 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 PLBD1Q6P4A8 553 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 CNKSR3Q6P9H4 555 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 TET1Q8NFU7 2136 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 TMEM38AQ9H6F2 299 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 WDR26Q9H7D7 661 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 CERS4Q9HA82 394 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 PLXNB2O15031 1838 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 ZAR1LA6NP61 321 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 ZNF670-ZNF695F2Z2N8 137 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 PLPP1O14494 284 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 MLIPQ5VWP3 458 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 YIPF7Q8N8F6 280 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 GDPD1Q8N9F7 314 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 OR4C6Q8NH72 309 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 SNAPC3Q92966 411 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 BTBD1Q9H0C5 482 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 PCBD2Q9H0N5 130 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 HHATLQ9HCP6 504 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 A3GALT2U3KPV4 340 aa15.25■□□□□ 0.03
PCDH1-203ENST00000394536 PDCD11Q14690 1871 aaKnown RBP15.25■□□□□ 0.03
PCDH1-203ENST00000394536 ATG2BQ96BY7 2078 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 LYRM1O43325 122 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 MMP11P24347 488 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 AHRP35869 848 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 METAP1P53582 386 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 PPP3R1P63098 170 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 PIP5KL1Q5T9C9 394 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 CCSAPQ6IQ19 270 aaPredicted RBP15.24■□□□□ 0.03
PCDH1-203ENST00000394536 C11orf88Q6PI97 169 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 NUP43Q8NFH3 380 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 NLGN4YQ8NFZ3 816 aaPredicted RBP15.24■□□□□ 0.03
PCDH1-203ENST00000394536 DEDD2Q8WXF8 326 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 VN1R3Q9BXE9 311 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 THSD1Q9NS62 852 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 PAPPA2Q9BXP8 1791 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 SLC5A10A0PJK1 596 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 HMX3A6NHT5 357 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 ETV5P41161 510 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 ETV1P50549 477 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 MLLT11Q13015 90 aaPredicted RBP15.24■□□□□ 0.03
PCDH1-203ENST00000394536 GPR19Q15760 415 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 HENMT1Q5T8I9 393 aaKnown RBP15.24■□□□□ 0.03
PCDH1-203ENST00000394536 VITQ6UXI7 678 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 GLCCI1Q86VQ1 547 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 PARGQ86W56 976 aa15.24■□□□□ 0.03
PCDH1-203ENST00000394536 CYB561A3Q8NBI2 242 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms