RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 C22orf42Q6IC83 251 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CASP12Q6UXS9 341 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 IL17RDQ8NFM7 739 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 OR52I1Q8NGK6 324 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 ELSPBP1Q96BH3 223 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM80Q96HE8 168 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 LRR1Q96L50 414 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CEP19Q96LK0 163 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 FCRL4Q96PJ5 515 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TRNT1Q96Q11 434 aaKnown RBP12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 OR2A14Q96R47 310 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 FERD3LQ96RJ6 166 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 DCLRE1CQ96SD1 692 aaKnown RBP12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 WDR26Q9H7D7 661 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 POLMQ9NP87 494 aaPredicted RBP12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 ATG4BQ9Y4P1 393 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 V9GYH0 126 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 UGT2B17O75795 530 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CH25HO95992 272 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 SOX18P35713 384 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 SSR2P43308 183 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 REEP5Q00765 189 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 IFITM2Q01629 132 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 SYT14P1Q58G82 188 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TUBA3EQ6PEY2 450 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 PHC2Q8IXK0 858 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D19Q8N5T2 526 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 OR8D4Q8NGM9 314 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TM9SF4Q92544 642 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 UBE2E3Q969T4 207 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TXNDC15Q96J42 360 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC35G5Q96KT7 338 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TM9SF2Q99805 663 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC30A2Q9BRI3 323 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TOR4AQ9NXH8 423 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CNIH4Q9P003 139 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 CLEC1BQ9P126 229 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 MOSPD1Q9UJG1 213 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 FBXW2Q9UKT8 454 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 TSC22D4Q9Y3Q8 395 aa12.7□□□□□ -0.38
GTF2F1-201ENST00000394456 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 SAGE2PA6NJ88 616 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 CDRT1O95170 752 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 SOX6P35712 828 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 BCL6P41182 706 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 RFX2P48378 723 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 RAB8AP61006 207 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 SNRPGP62308 76 aaKnown RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 TEKQ02763 1124 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 MFSD4BQ5TF39 518 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM107Q6UX40 140 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 B3GLCTQ6Y288 498 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 NUDT13Q86X67 352 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 NANOGP1Q8N7R0 232 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 OR14C36Q8NHC7 312 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 C9orf43Q8TAL5 461 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 CREB3L4Q8TEY5 395 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 GATAD2BQ8WXI9 593 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 CNRIP1Q96F85 164 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 DHRS1Q96LJ7 313 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 C12orf66Q96MD2 445 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 HOXD1Q9GZZ0 328 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 AHSPQ9NZD4 102 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 MGAT4BQ9UQ53 548 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 UGT2A1Q9Y4X1 527 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 SCN3AQ9NY46 2000 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A1W2PR48 441 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 FAAHO00519 579 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 TFECO14948 347 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 HMGN2P05204 90 aaKnown RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 ERGP11308 486 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 C5AR1P21730 350 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 FRKP42685 505 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 KIR2DL1P43626 348 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 CLDN2P57739 230 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 LTB4RQ15722 352 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 NUDT18Q6ZVK8 323 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 FBXL6Q8N531 539 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 ZNF582Q96NG8 517 aaPredicted RBP12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 RACGAP1Q9H0H5 632 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 MMP28Q9H239 520 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 WASH6PQ9NQA3 447 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 CFL2Q9Y281 166 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 A3GALT2U3KPV4 340 aa12.69□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A0A6YYD5 115 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ARRDC5A6NEK1 342 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 DVL2O14641 736 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 PTTG1O95997 202 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ADH1BP00325 375 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 MSL3P1P0C860 447 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 RPS25P62851 125 aaKnown RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ENPP2Q13822 863 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 OR4C11Q6IEV9 310 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM184AQ6ZMB5 413 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 USP30Q70CQ3 517 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 VRK2Q86Y07 508 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SUN3Q8TAQ9 357 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms