RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SH3BGRLO75368 114 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 G6PDP11413 515 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 JUPP14923 745 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 ZFP36L2P47974 494 aaKnown RBP17.94■□□□□ 0.46
CCDC50-202ENST00000392456 KDM4DQ6B0I6 523 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 TMPRSS11BQ86T26 416 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 LINC01555Q8NAE3 123 aa17.94■□□□□ 0.46
CCDC50-202ENST00000392456 GOT1L1Q8NHS2 421 aaPredicted RBP17.94■□□□□ 0.46
CCDC50-202ENST00000392456 MS4A7Q9GZW8 240 aaPredicted RBP17.94■□□□□ 0.46
CCDC50-202ENST00000392456 FRYLO94915 3013 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 B4DXG7 233 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 RFPL3O75679 317 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 RASGRP1O95267 797 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 IDSP22304 550 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 PSMB5P28074 263 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 KCNK10P57789 538 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 FRG2Q64ET8 278 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 ABI3BPQ7Z7G0 1075 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 SFTPA2Q8IWL1 248 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 MIER2Q8N344 545 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 MYDGFQ969H8 173 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 FRG2BQ96QU4 278 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 ACTL8Q9H568 366 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 ABCD2Q9UBJ2 740 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 ZDBF2Q9HCK1 2354 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 PRAMEF26H0Y7S4 382 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 APBB3O95704 486 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 FCER2P06734 321 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 GDI2P50395 445 aaKnown RBP17.93■□□□□ 0.46
CCDC50-202ENST00000392456 ATP4BP51164 291 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 CCR5P51681 352 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 RPL38P63173 70 aaKnown RBP17.93■□□□□ 0.46
CCDC50-202ENST00000392456 HYAL2Q12891 473 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 DDX39BQ13838 428 aaKnown RBP17.93■□□□□ 0.46
CCDC50-202ENST00000392456 CYP51A1Q16850 503 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 UAP1L1Q3KQV9 507 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 VPS26BQ4G0F5 336 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 C5orf46Q6UWT4 87 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 TRILQ7L0X0 811 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 SPATA19Q7Z5L4 167 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 ZNF740Q8NDX6 193 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 HYLS1Q96M11 299 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 MBOAT4Q96T53 435 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 POLR3HQ9Y535 204 aaPredicted RBP17.93■□□□□ 0.46
CCDC50-202ENST00000392456 HS3ST3A1Q9Y663 406 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 KCNMB2Q9Y691 235 aa17.93■□□□□ 0.46
CCDC50-202ENST00000392456 HSD17B1P14061 328 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 CAPN3P20807 821 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 ISL1P61371 349 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 DAB2P98082 770 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 KIAA0040Q15053 153 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 RPS6KA2Q15349 733 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 LIPJQ5W064 366 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 WDR20Q8TBZ3 569 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 PROKR1Q8TCW9 393 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 WBP1Q96G27 269 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 SLC6A18Q96N87 628 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 RDH12Q96NR8 316 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 SLC52A3Q9NQ40 469 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 GSN-AS1Q9NRJ2 163 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 TCRBV5S2A0A599 114 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 ARPC2O15144 300 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 RGS14O43566 566 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 XPNPEP2O43895 674 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 SEC22BO75396 215 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 POU1F1P28069 291 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 NUP62P37198 522 aaPredicted RBP17.92■□□□□ 0.46
CCDC50-202ENST00000392456 EMX2Q04743 252 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 PTGR1Q14914 329 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 ANGPT1Q15389 498 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 SF1Q15637 639 aaKnown RBP17.92■□□□□ 0.46
CCDC50-202ENST00000392456 RPE65Q16518 533 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 SPATS1Q496A3 300 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 KRT73Q86Y46 540 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 NRROSQ86YC3 692 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 GDPD1Q8N9F7 314 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 ARL5BQ96KC2 179 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 NELL2Q99435 816 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 BRINP2Q9C0B6 783 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 AMBRA1Q9C0C7 1298 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 CHRDQ9H2X0 955 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 RNF121Q9H920 327 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 SLC22A7Q9Y694 548 aa17.92■□□□□ 0.46
CCDC50-202ENST00000392456 TDRD6O60522 2096 aaKnown RBP17.91■□□□□ 0.46
CCDC50-202ENST00000392456 TP53BP1Q12888 1972 aaPredicted RBP17.91■□□□□ 0.46
CCDC50-202ENST00000392456 A0A1W2PPC4 97 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 A0A1W2PPV9 198 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 NR5A2O00482 541 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 HRO43593 1189 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 ETHE1O95571 254 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 PDGFBP01127 241 aaPredicted RBP17.91■□□□□ 0.46
CCDC50-202ENST00000392456 CELA2BP08218 269 aaPredicted RBP17.91■□□□□ 0.46
CCDC50-202ENST00000392456 ERGP11308 486 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 RAB13P51153 203 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 SLC5A11Q8WWX8 675 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 CLDN23Q96B33 292 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 TBC1D20Q96BZ9 403 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 APIPQ96GX9 242 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 CAMK1GQ96NX5 476 aa17.91■□□□□ 0.46
CCDC50-202ENST00000392456 SLC22A4Q9H015 551 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms