RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SPRTNQ9H040 489 aaPredicted RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 MAT2BQ9NZL9 334 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 HCN3Q9P1Z3 774 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 MYRFQ9Y2G1 1151 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 FAM32AQ9Y421 112 aaKnown RBP10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 TESMINQ9Y4I5 508 aa10.72□□□□□ -0.69
SMARCAL1-203ENST00000392128 WDR87Q6ZQQ6 2873 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 NINQ8N4C6 2090 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 ADAMTS9Q9P2N4 1935 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 TMEM221A6NGB7 291 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 H3BNH8 94 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 M0R296 226 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 JRKO75564 520 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 CLIC3O95833 236 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 ARL4DP49703 201 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 IGLV3-21P80748 117 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 SPIBQ01892 262 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 KCNAB2Q13303 367 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 KCNAB1Q14722 419 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 NR0B2Q15466 257 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZCCHC12Q6PEW1 402 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 APLFQ8IW19 511 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 TMEM105Q8N8V8 129 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 ZNF555Q8NEP9 628 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 RMND5BQ96G75 393 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 SLC35A4Q96G79 324 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 TMEM9Q9P0T7 183 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 KCND3Q9UK17 655 aa10.71□□□□□ -0.69
SMARCAL1-203ENST00000392128 UNC13CQ8NB66 2214 aa10.71□□□□□ -0.7
SMARCAL1-203ENST00000392128 ASXL3Q9C0F0 2248 aa10.71□□□□□ -0.7
SMARCAL1-203ENST00000392128 RP1P56715 2156 aa10.71□□□□□ -0.7
SMARCAL1-203ENST00000392128 DMDP11532 3685 aa10.71□□□□□ -0.7
SMARCAL1-203ENST00000392128 CASC3O15234 703 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 PCDHGA12O60330 932 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CTNSO60931 367 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 ITGAMP11215 1152 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CNR2P34972 360 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 LIMS1P48059 325 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 SEPHS1P49903 392 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 HMGA2P52926 109 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 SQSTM1Q13501 440 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 C16orf62Q7Z3J2 963 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 RABEPKQ7Z6M1 372 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 OFCC1Q8IZS5 231 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 FAM181AQ8N9Y4 354 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 DTWD2Q8NBA8 298 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC16A11Q8NCK7 471 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 SIMC1Q8NDZ2 872 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 PIK3C3Q8NEB9 887 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 MMABQ96EY8 250 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 PEX11GQ96HA9 241 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC38A1Q9H2H9 487 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 VPS13AQ96RL7 3174 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 LY6G6EA0A0G2JKS1 128 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 A8MVJ9 347 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 TMEM150CB9EJG8 249 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 J3KTA2 159 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CLDN4O14493 209 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC16A6O15403 523 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 TOX3O15405 576 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR2B3O76000 313 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CDH2P19022 906 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 PIGAP37287 484 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 YAP1P46937 504 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 GCGRP47871 477 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CDH12P55289 794 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 MAT1AQ00266 395 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 APOFQ13790 326 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 TTC33Q6PID6 262 aaPredicted RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 ISLR2Q6UXK2 745 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CEP76Q8TAP6 659 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 GIPC3Q8TF64 312 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 MVB12AQ96EY5 273 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 MUS81Q96NY9 551 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 PSD2Q9BQI7 771 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 PINK1Q9BXM7 581 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 MRPS26Q9BYN8 205 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 PIGUQ9H490 435 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 ZNF768Q9H5H4 540 aaKnown RBP10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CAPN10Q9HC96 672 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 FSCN3Q9NQT6 498 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 CUTCQ9NTM9 273 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 ACER3Q9NUN7 267 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 KIF17Q9P2E2 1029 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 U3KQA8 63 aa10.7□□□□□ -0.7
SMARCAL1-203ENST00000392128 MYOCOSA0A1B0GUC4 107 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 OR10H2O60403 315 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CFIP05156 583 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 CT62P0C5K7 136 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ACP2P11117 423 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 NELFEP18615 380 aaKnown RBP10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 HPCAP84074 193 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 MAP4K2Q12851 820 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 SLC13A2Q13183 592 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 IL18R1Q13478 541 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 MICAQ29983 383 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 ARHGAP11BQ3KRB8 267 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 KCTD21Q4G0X4 260 aa10.69□□□□□ -0.7
SMARCAL1-203ENST00000392128 OLIG3Q7RTU3 272 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms