RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SNED1Q8TER0 1413 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 TEX48A0A1B0GUV7 120 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 CYB561D2O14569 222 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 CFLARO15519 480 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 STK17BO94768 372 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 TRIM16O95361 564 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SEMA4FO95754 770 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 FCGR3AP08637 254 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 IL4RP24394 825 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 UCP1P25874 307 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 CALML3P27482 149 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 CCND2P30279 289 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SPRP35270 261 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SGSHP51688 502 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 HTD2P86397 168 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 MS4A2Q01362 244 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 NAAAQ02083 359 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 FCHO2Q0JRZ9 810 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 RAPSNQ13702 412 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SYCP1Q15431 976 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 PCK2Q16822 640 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF699Q32M78 642 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 ANKRD55Q3KP44 614 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 LRIT3Q3SXY7 679 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 TTC31Q49AM3 519 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 LDLRAP1Q5SW96 308 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 C9orf66Q5T8R8 295 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 EMBQ6PCB8 327 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 UNC5DQ6UXZ4 953 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 GPRIN3Q6ZVF9 776 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 STXBP4Q6ZWJ1 553 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 GET4Q7L5D6 327 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 OTUD6AQ7L8S5 288 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 GOLGA7Q7Z5G4 137 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 ADCK1Q86TW2 530 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SLC47A2Q86VL8 602 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 RANBP3LQ86VV4 465 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 PYROXD2Q8N2H3 581 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 C4orf32Q8N8J7 132 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF491Q8N8L2 437 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 C17orf47Q8NEP4 570 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 FLVCR1-AS1Q8TAF5 88 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 GIMAP1Q8WWP7 306 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 NCLNQ969V3 563 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 BIRC7Q96CA5 298 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 NTNG2Q96CW9 530 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 WRAP53Q9BUR4 548 aaKnown RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 GPR174Q9BXC1 333 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 LRRCC1Q9C099 1032 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 HEXA-AS1Q9H8Q6 139 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 ROPN1Q9HAT0 212 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 IL1RL2Q9HB29 575 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 NRN1Q9NPD7 142 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF446Q9NWS9 450 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 UTP6Q9NYH9 597 aaKnown RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 TAS2R16Q9NYV7 291 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SEC14L4Q9UDX3 406 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 CIDEBQ9UHD4 219 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 KLK13Q9UKR3 277 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 EMCNQ9ULC0 261 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 KLF2Q9Y5W3 355 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 CPQQ9Y646 472 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SYNJ2O15056 1496 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 CEP162Q5TB80 1403 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 SMG6Q86US8 1419 aaKnown RBP2.51□□□□□ -2.01
PTPRC-205ENST00000391970 NCOA3Q9Y6Q9 1424 aa2.51□□□□□ -2.01
PTPRC-205ENST00000391970 FER1L5A0AVI2 2057 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 RGSL1A5PLK6 1076 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 RPL37AP8A6NKH3 93 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 FOXI3A8MTJ6 420 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 NDUFA7O95182 113 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 OAS1P00973 400 aaKnown RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 CGAP01215 116 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 IGHG3P01860 377 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 GSTA1P08263 222 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 HMGN5P82970 282 aaKnown RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 DPYSQ14117 519 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 INAQ16352 499 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 ZSCAN26Q16670 478 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 VWA2Q5GFL6 755 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 LINC00242Q5T6M2 205 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 ARMCX5Q6P1M9 558 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 RFWD3Q6PCD5 774 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 ATRAIDQ6UW56 229 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 ZNF841Q6ZN19 808 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 PAQR9Q6ZVX9 377 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 CATSPER4Q7RTX7 472 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 LUZP1Q86V48 1076 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 GPBP1Q86WP2 473 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 ERC1Q8IUD2 1116 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 EFCAB13Q8IY85 973 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 CERS5Q8N5B7 392 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 BCORP1Q8N888 145 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 BEST4Q8NFU0 473 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 SPATA3Q8NHX4 192 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 WDR36Q8NI36 951 aaKnown RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 FCGR1BQ92637 280 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 TAF4BQ92750 862 aa2.5□□□□□ -2.01
PTPRC-205ENST00000391970 SYAP1Q96A49 352 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-205ENST00000391970 SLC25A36Q96CQ1 311 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms