RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 TBXA2RP21731 343 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PAX7P23759 505 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CPT2P23786 658 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 HOXD13P35453 343 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SLC15A1P46059 708 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CDKN1CP49918 316 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ASCL1P50553 236 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CRYBA2P53672 197 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CASP9P55211 416 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CDH4P55283 916 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SUMO1P63165 101 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TSPY1Q01534 308 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 GFPT1Q06210 699 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 LOXL1Q08397 574 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 BIKQ13323 160 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SQSTM1Q13501 440 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PIGHQ14442 188 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PTPN14Q15678 1187 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CHRNA6Q15825 494 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 EXT1Q16394 746 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 INSCQ1MX18 579 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MICAQ29983 383 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RFTN2Q52LD8 501 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 DNAJC21Q5F1R6 531 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PAGE3Q5JUK9 113 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 DARS2Q6PI48 645 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ZNF773Q6PK81 442 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 NUDT13Q86X67 352 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ARID3BQ8IVW6 561 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RIMKLAQ8IXN7 391 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CFAP206Q8IYR0 622 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MYO1HQ8N1T3 1032 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SLC15A4Q8N697 577 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 OR4D10Q8NGI6 311 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CHURC1Q8WUH1 139 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 C15orf40Q8WUR7 153 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 NRG4Q8WWG1 115 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SECISBP2LQ93073 1101 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ORAI1Q96D31 301 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CCDC34Q96HJ3 373 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 Q96M85 177 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ZNF570Q96NI8 536 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 IP6K3Q96PC2 410 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 OR2A5Q96R48 311 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 LPAR4Q99677 370 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 EIF2AK1Q9BQI3 630 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CNPY3Q9BT09 278 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 DPH7Q9BTV6 452 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ADAT1Q9BUB4 502 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 NYXQ9GZU5 481 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CXorf56Q9H5V9 222 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 KAT8Q9H7Z6 458 aaKnown RBP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CABP5Q9NP86 173 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 P4HTMQ9NXG6 502 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SPG21Q9NZD8 308 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SAMD15Q9P1V8 674 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MGAT4AQ9UM21 535 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 NEUROG3Q9Y4Z2 214 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ARID2Q68CP9 1835 aa-2.77□□□□□ -2.85
RNU6-1340P-201ENST00000384438 A0A096LNT2 108 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 FRMD3A2A2Y4 597 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 DPRXA6NFQ7 191 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MYO1GB0I1T2 1018 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 E9PI62 339 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 M0R2T5 61 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SULT2B1O00204 365 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 EBAG9O00559 213 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 POLR1CO15160 346 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 PIP5K1CO60331 668 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 NDUFS2O75306 463 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CNMDO75829 334 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ALDH1L1O75891 902 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 RHOBTB1O94844 696 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MFN2O95140 757 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 IGHDP01880 384 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CHRNA1P02708 482 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ALDOAP04075 364 aaKnown RBP-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CSF2P04141 144 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CSF1P09603 554 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MTHFD2P13995 350 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 BDNFP23560 247 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SMARCA1P28370 1054 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ERCC5P28715 1186 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 POU3F4P49335 361 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ACOT2P49753 483 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 UCP2P55851 309 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 MAZP56270 477 aaKnown RBP-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 GCNT1Q02742 428 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 STK3Q13188 491 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 SRSF9Q13242 221 aaKnown RBP eCLIP-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 TSTA3Q13630 321 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 DPYSL3Q14195 570 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ACAP2Q15057 778 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 LGALS9BQ3B8N2 356 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 ALDH1L2Q3SY69 923 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 OR2B11Q5JQS5 317 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 CXorf66Q5JRM2 361 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 LCN1P1Q5VSP4 162 aa-2.78□□□□□ -2.85
RNU6-1340P-201ENST00000384438 Q5XG85 94 aa-2.78□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms