RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 MVB12AQ96EY5 273 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 ZNF300Q96RE9 604 aaPredicted RBP18.98■□□□□ 0.63
CPNE9-202ENST00000383831 ALOXE3Q9BYJ1 711 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 AMBRA1Q9C0C7 1298 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 ARRDC1-AS1Q9H2J1 176 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 REEP1Q9H902 201 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 GIN1Q9NXP7 522 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 USE1Q9NZ43 259 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 PDP2Q9P2J9 529 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 SEC14L3Q9UDX4 400 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 LIPT1Q9Y234 373 aa18.98■□□□□ 0.63
CPNE9-202ENST00000383831 A0A0G2JPF8 293 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 DUXAA6NLW8 204 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 HNRNPCL2B2RXH8 293 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 HNRNPCL3B7ZW38 293 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 HYAL3O43820 417 aaPredicted RBP18.97■□□□□ 0.63
CPNE9-202ENST00000383831 DPM1O60762 260 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 JRKO75564 520 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 SERPINB7O75635 380 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 BMP10O95393 424 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 FESP07332 822 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 HNRNPCL4P0DMR1 293 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 MAOAP21397 527 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 FPR1P21462 350 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 RRM2P31350 389 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 DNAJA1P31689 397 aaKnown RBP18.97■□□□□ 0.63
CPNE9-202ENST00000383831 KCNJ5P48544 419 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 DAB2P98082 770 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 PUM1Q14671 1186 aaKnown RBP eCLIP18.97■□□□□ 0.63
CPNE9-202ENST00000383831 LAPTM4AQ15012 233 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 ATAD3BQ5T9A4 648 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 PRAMEF8Q5VWM4 474 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 PRAMEF7Q5VXH5 474 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 TCEAL6Q6IPX3 200 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 HEPHL1Q6MZM0 1159 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 C16orf62Q7Z3J2 963 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 CARM1Q86X55 608 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 KRT73Q86Y46 540 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 CDS1Q92903 461 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 TCEAL3Q969E4 200 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 RBM4BQ9BQ04 359 aaKnown RBP18.97■□□□□ 0.63
CPNE9-202ENST00000383831 NDC1Q9BTX1 674 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 RBM4Q9BWF3 364 aaKnown RBP18.97■□□□□ 0.63
CPNE9-202ENST00000383831 FANCEQ9HB96 536 aa18.97■□□□□ 0.63
CPNE9-202ENST00000383831 IFT80Q9P2H3 777 aaPredicted RBP18.97■□□□□ 0.63
CPNE9-202ENST00000383831 SAMHD1Q9Y3Z3 626 aaKnown RBP18.97■□□□□ 0.63
CPNE9-202ENST00000383831 IGHV5-10-1A0A0J9YXX1 117 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 LYNP07948 512 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 ETS2P15036 469 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 YAP1P46937 504 aaKnown RBP18.96■□□□□ 0.63
CPNE9-202ENST00000383831 HSD17B7P56937 341 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 DUSP5Q16690 384 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 SLC36A3Q495N2 470 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 EXOSC6Q5RKV6 272 aaKnown RBP18.96■□□□□ 0.63
CPNE9-202ENST00000383831 PRR23CQ6ZRP0 262 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 HMGN2P46Q86SG4 172 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 ST13P4Q8IZP2 240 aaPredicted RBP18.96■□□□□ 0.63
CPNE9-202ENST00000383831 VWA5B2Q8N398 1253 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 RCBTB1Q8NDN9 531 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 RASSF5Q8WWW0 418 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 PROX1Q92786 737 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 TRNT1Q96Q11 434 aaKnown RBP18.96■□□□□ 0.63
CPNE9-202ENST00000383831 ZNF347Q96SE7 839 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 BTBD2Q9BX70 525 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 ANKRD60Q9BZ19 345 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 GABARAPL1Q9H0R8 117 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 SLC38A1Q9H2H9 487 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 CXorf21Q9HAI6 301 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 EXD2Q9NVH0 621 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 TESMINQ9Y4I5 508 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 CCDC88CQ9P219 2028 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 MAGEA13PA6NCF6 341 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 CBX7O95931 251 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 THRBP10828 461 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 ITGA2P17301 1181 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 MAPK10P53779 464 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 KCNC4Q03721 635 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 MAP4K2Q12851 820 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 DUSP8Q13202 625 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 GALNT12Q8IXK2 581 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 CYGBQ8WWM9 190 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 CCDC74BQ96LY2 380 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 EPYCQ99645 322 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 YIPF2Q9BWQ6 316 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 SOX17Q9H6I2 414 aaPredicted RBP18.96■□□□□ 0.63
CPNE9-202ENST00000383831 LANCL2Q9NS86 450 aa18.96■□□□□ 0.63
CPNE9-202ENST00000383831 DSPPQ9NZW4 1301 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 J3KTA2 159 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 DSCR3O14972 297 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 ZIC2O95409 532 aaPredicted RBP18.95■□□□□ 0.62
CPNE9-202ENST00000383831 AGR2O95994 175 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 IFNW1P05000 195 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 ARHGDIAP52565 204 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 PDX1P52945 283 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 CHRNEQ04844 493 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 ZIK1Q3SY52 487 aaPredicted RBP18.95■□□□□ 0.62
CPNE9-202ENST00000383831 COMTD1Q86VU5 262 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 DHRSXQ8N5I4 330 aa18.95■□□□□ 0.62
CPNE9-202ENST00000383831 RBM18Q96H35 190 aaKnown RBP18.95■□□□□ 0.62
CPNE9-202ENST00000383831 ZNF354BQ96LW1 612 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms