RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 PCDHA9Q9Y5H5 950 aa16.3■□□□□ 0.2
RPUSD3-201ENST00000383820 CLCA1A8K7I4 914 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 STX16-NPEPL1H3BU86 382 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 STX16O14662 325 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 ICOSLGO75144 302 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 CBR3O75828 277 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 ALDOAP04075 364 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 MAPK12P53778 367 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 DCAF7P61962 342 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 EEF1A1P68104 462 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 C2orf54Q08AI8 447 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 MGAT2Q10469 447 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 IFT88Q13099 833 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 GGTA1PQ4G0N0 100 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 EEF1A1P5Q5VTE0 462 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 TTC19Q6DKK2 380 aaPredicted RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 ENPP6Q6UWR7 440 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 ADGRE4PQ86SQ3 457 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 YRDCQ86U90 279 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 BIVMQ86UB2 503 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 PTGR2Q8N8N7 351 aaPredicted RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 C9orf106Q8NAJ2 232 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 OMA1Q96E52 524 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 DTNBP1Q96EV8 351 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 LCORQ96JN0 433 aaPredicted RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 DACH2Q96NX9 599 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 YIPF4Q9BSR8 244 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 MRPL1Q9BYD6 325 aaKnown RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 OR2B2Q9GZK3 357 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 ACBD3Q9H3P7 528 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 GSX1Q9H4S2 264 aaPredicted RBP16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 MAT2BQ9NZL9 334 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 PSME2Q9UL46 239 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 DTX4Q9Y2E6 619 aa16.29■□□□□ 0.2
RPUSD3-201ENST00000383820 FLNAP21333 2647 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 RCBTB2O95199 551 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 RBP1P09455 135 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 DRD2P14416 443 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 CSNK2A2P19784 350 aaPredicted RBP16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 DEKP35659 375 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 PTGDSP41222 190 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 AGFG1P52594 562 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 TRAF3Q13114 568 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 WNT2BQ93097 391 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 ISL2Q96A47 359 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 CTHRC1Q96CG8 243 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 NODALQ96S42 347 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 TUBA1CQ9BQE3 449 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 RBM24Q9BX46 236 aaKnown RBP16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 ITPAQ9BY32 194 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 BRINP2Q9C0B6 783 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 PRODH2Q9UF12 536 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 BCAP29Q9UHQ4 241 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 PCTPQ9UKL6 214 aa16.28■□□□□ 0.2
RPUSD3-201ENST00000383820 TO15178 435 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 HRGP04196 525 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 DRD5P21918 477 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 CHMP24386 653 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 HOXC12P31275 282 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 PPICP45877 212 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 SLCO1A2P46721 670 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 PLCXD2Q0VAA5 305 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 NNATQ16517 81 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 FAM111BQ6SJ93 734 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 COMMD6Q7Z4G1 85 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 MMP21Q8N119 569 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 SMPDL3BQ92485 455 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 MRRFQ96E11 262 aaKnown RBP16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 PHF21BQ96EK2 531 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 LRRC1Q9BTT6 524 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 VPS11Q9H270 941 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 PIGMQ9H3S5 423 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 ELOVL6Q9H5J4 265 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 ZBTB26Q9HCK0 441 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 NEUROD4Q9HD90 331 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 BEX4Q9NWD9 120 aaPredicted RBP16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 KLRF1Q9NZS2 232 aa16.27■□□□□ 0.2
RPUSD3-201ENST00000383820 PRAMEF25A6NGN4 478 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 H0Y3Z8 333 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 UGT2B11O75310 529 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 ERAL1O75616 437 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 CBX7O95931 251 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 PHBP35232 272 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 SOX18P35713 384 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 FEN1P39748 380 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 GFRA1P56159 465 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 FOXF2Q12947 444 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 GAB1Q13480 694 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 EXOSC7Q15024 291 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 TRADDQ15628 312 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 UAP1Q16222 522 aaPredicted RBP16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 MILR1Q7Z6M3 343 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 PLD6Q8N2A8 252 aaKnown RBP16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 WDSUB1Q8N9V3 476 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 WFDC11Q8NEX6 87 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 OR14L1PQ8NHC6 308 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 TMCO6Q96DC7 493 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 C18orf12Q96KH6 178 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 ACSS3Q9H6R3 686 aa16.26■□□□□ 0.19
RPUSD3-201ENST00000383820 BRF2Q9HAW0 419 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms