RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 LGI1O95970 557 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 GABRG2P18507 467 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 MAGP20916 626 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 RCVRNP35243 200 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 COX10Q12887 443 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 NDUFA9Q16795 377 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 DGUOKQ16854 277 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 RGS21Q2M5E4 152 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 Q6ZSR6 202 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 GJD3Q8N144 294 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 C9orf43Q8TAL5 461 aaPredicted RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 CRELD1Q96HD1 420 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 Q96MT0 163 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 YIPF4Q9BSR8 244 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 POT1Q9NUX5 634 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 CNOT2Q9NZN8 540 aaKnown RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 SLC13A4Q9UKG4 626 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 GOLGA4Q13439 2230 aaKnown RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 MDC1Q14676 2089 aaKnown RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 GSAPA4D1B5 854 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 OR5K4A6NMS3 321 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 SULT1C4O75897 302 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 SLITRK5O94991 958 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 AGR2O95994 175 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 EIF2S1P05198 315 aaKnown RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 CHRM4P08173 479 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 ALPPL2P10696 532 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 UGT2B7P16662 529 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 CPN2P22792 545 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 POU1F1P28069 291 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 TNFRSF17Q02223 184 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 FOXD4Q12950 439 aaPredicted RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 ZNF750Q32MQ0 723 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 FIGLAQ6QHK4 219 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 ABHD13Q7L211 337 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 LRRC25Q8N386 305 aaPredicted RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 SLC44A3Q8N4M1 653 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 ZNF655Q8N720 491 aaPredicted RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 FLVCR1-AS1Q8TAF5 88 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 SLC38A4Q969I6 547 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 MSANTD3Q96H12 275 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 TRNT1Q96Q11 434 aaKnown RBP11.87□□□□□ -0.51
VPS16-202ENST00000380445 OR2A5Q96R48 311 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 OR7D2Q96RA2 312 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 ACTRT3Q9BYD9 372 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 GSDMCQ9BYG8 508 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 ACTR10Q9NZ32 417 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 A4GNTQ9UNA3 340 aa11.87□□□□□ -0.51
VPS16-202ENST00000380445 OR6C74A6NCV1 312 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 SYT5O00445 386 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 B3GALT2O43825 422 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 SEMA7AO75326 666 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 CD36P16671 472 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 POLR2CP19387 275 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 IFNA8P32881 189 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 CNR2P34972 360 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 MC3RP41968 323 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 OLR1P78380 273 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 GPR18Q14330 331 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 FAM209AQ5JX71 171 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 VASH1Q7L8A9 365 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 RBM45Q8IUH3 476 aaKnown RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 OR4D11Q8NGI4 311 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 OR9A2Q8NGT5 310 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 RERGQ96A58 199 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 PRRC1Q96M27 445 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 POLR2J3Q9H1A7 115 aaKnown RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 POLMQ9NP87 494 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 FBXO9Q9UK97 447 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 C2orf74A8MZ97 194 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 NME6O75414 186 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 LCKP06239 509 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 SMIM10L1P0DMW3 83 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 C21orf33P30042 268 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 DUSP2Q05923 314 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 ST3GAL4Q11206 333 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 TARDBPQ13148 414 aaKnown RBP eCLIP11.86□□□□□ -0.51
VPS16-202ENST00000380445 PIN1Q13526 163 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 SEC23BQ15437 767 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 MANEAQ5SRI9 462 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 CASP12Q6UXS9 341 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 SLCO6A1Q86UG4 719 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 OR4K14Q8NGD5 310 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 OR10G6Q8NH81 332 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 SLC7A13Q8TCU3 470 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 GPBAR1Q8TDU6 330 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 HMGB4Q8WW32 186 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 SMIM10Q96HG1 83 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 FCRL4Q96PJ5 515 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 ZFYVE21Q9BQ24 234 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
VPS16-202ENST00000380445 REV1Q9UBZ9 1251 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 NDOR1Q9UHB4 597 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 SPACA6W5XKT8 324 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 COL4A2P08572 1712 aa11.86□□□□□ -0.51
VPS16-202ENST00000380445 KIR2DS5A0A0G2JLQ3 304 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 A0A0G2JNG1 304 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms