RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 H0YGG7 62 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 P2RX6O15547 441 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 OR10H3O60404 316 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 ALPPP05187 535 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 CDK1P06493 297 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 CHRNB1P11230 501 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 CHMP24386 653 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 ARF3P61204 181 aaPredicted RBP21.7■■□□□ 1.06
VPS16-201ENST00000380443 RUNX2Q13950 521 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 HEPHL1Q6MZM0 1159 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 SLC16A12Q6ZSM3 486 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 FAM46DQ8NEK8 389 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 OR4D11Q8NGI4 311 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 ADAMTS15Q8TE58 950 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 SLC37A2Q8TED4 501 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 GIMAP5Q96F15 307 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 KLHDC7BQ96G42 594 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 C16orf58Q96GQ5 468 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 CNOT2Q9NZN8 540 aaKnown RBP21.7■■□□□ 1.06
VPS16-201ENST00000380443 SLC13A4Q9UKG4 626 aa21.7■■□□□ 1.06
VPS16-201ENST00000380443 EFCAB10A6NFE3 127 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 SEMA7AO75326 666 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 BCAS1O75363 584 aaPredicted RBP21.69■■□□□ 1.06
VPS16-201ENST00000380443 IFNA8P32881 189 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 MASP1P48740 699 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 MAPK10P53779 464 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 FAM214AQ32MH5 1076 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 DEFB134Q4QY38 66 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 Q6ZPB1 254 aaPredicted RBP21.69■■□□□ 1.06
VPS16-201ENST00000380443 OR2L13Q8N349 312 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 FLCNQ8NFG4 579 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 C9orf43Q8TAL5 461 aaPredicted RBP21.69■■□□□ 1.06
VPS16-201ENST00000380443 Q96MT0 163 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 GPR174Q9BXC1 333 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 CLN6Q9NWW5 311 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 REV1Q9UBZ9 1251 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 ALPPL2P10696 532 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 PORP16435 677 aaPredicted RBP21.69■■□□□ 1.06
VPS16-201ENST00000380443 PRKAR1BP31321 381 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 MAP2K4P45985 399 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 SNRPGP62308 76 aaKnown RBP21.69■■□□□ 1.06
VPS16-201ENST00000380443 TDGQ13569 410 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 MOGQ16653 247 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 MFSD12Q6NUT3 480 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 ARMC6Q6NXE6 501 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 C16orf62Q7Z3J2 963 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 PARGQ86W56 976 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 ZCCHC10Q8TBK6 192 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 GGHQ92820 318 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 CRELD1Q96HD1 420 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 CSF3RQ99062 836 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 ARHGDIGQ99819 225 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 YIPF4Q9BSR8 244 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 SLC38A1Q9H2H9 487 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 CHRDQ9H2X0 955 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 ANKRD19PQ9H560 264 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 KLHL28Q9NXS3 571 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 IFT52Q9Y366 437 aa21.69■■□□□ 1.06
VPS16-201ENST00000380443 OR5K3A6NET4 321 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 FADS2O95864 444 aaKnown RBP21.68■■□□□ 1.06
VPS16-201ENST00000380443 POU2F1P14859 743 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 HPCAP84074 193 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 ZNF311Q5JNZ3 666 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 SLX4IPQ5VYV7 408 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 PGBD2Q6P3X8 592 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 RBM45Q8IUH3 476 aaKnown RBP21.68■■□□□ 1.06
VPS16-201ENST00000380443 CCDC103Q8IW40 242 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 TSTD1Q8NFU3 115 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 TANKQ92844 425 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 CACYBPQ9HB71 228 aaKnown RBP21.68■■□□□ 1.06
VPS16-201ENST00000380443 MUTYHQ9UIF7 546 aa21.68■■□□□ 1.06
VPS16-201ENST00000380443 A0A087WV62 115 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 CLDN24A6NM45 220 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 SOX30O94993 753 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 CPMP14384 443 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 GSTM3P21266 225 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 PSMB9P28065 219 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 IFNGR2P38484 337 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 SEC23BQ15437 767 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 CTF1Q16619 201 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 ZCCHC12Q6PEW1 402 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 CCDC81Q6ZN84 652 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 PTCHD4Q6ZW05 846 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 P2RY8Q86VZ1 359 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 LACC1Q8IV20 430 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 TBC1D15Q8TC07 691 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 POLR2J3Q9H1A7 115 aaKnown RBP21.67■■□□□ 1.06
VPS16-201ENST00000380443 PCED1AQ9H1Q7 454 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 TCEAL2Q9H3H9 227 aaPredicted RBP21.67■■□□□ 1.06
VPS16-201ENST00000380443 SEMA6CQ9H3T2 930 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 MTHFD2LQ9H903 347 aaPredicted RBP21.67■■□□□ 1.06
VPS16-201ENST00000380443 MUC3AQ02505 3323 aa21.67■■□□□ 1.06
VPS16-201ENST00000380443 LOC105369274A0A096LPK9 316 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 LOC102723532A0A0G2JNH3 316 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 ZNF182P17025 639 aaPredicted RBP21.66■■□□□ 1.06
VPS16-201ENST00000380443 KLHL35Q6PF15 583 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 Q6ZS52 159 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 UBALD2Q8IYN6 164 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 OR4N4Q8N0Y3 316 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 SLC7A13Q8TCU3 470 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms