RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ARMC7Q9H6L4 198 aa7.28□□□□□ -1.24
CDKL5-202ENST00000379996 ACTR10Q9NZ32 417 aa7.28□□□□□ -1.24
CDKL5-202ENST00000379996 GMEB2Q9UKD1 530 aa7.28□□□□□ -1.24
CDKL5-202ENST00000379996 ATXN7O15265 892 aaPredicted RBP7.27□□□□□ -1.24
CDKL5-202ENST00000379996 RGS10O43665 173 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 GMNNO75496 209 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 ANKRD34CP0C6C1 535 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 ACP1P24666 158 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 TIA1P31483 386 aaKnown RBP eCLIP7.27□□□□□ -1.24
CDKL5-202ENST00000379996 FRKP42685 505 aaPredicted RBP7.27□□□□□ -1.24
CDKL5-202ENST00000379996 CAPZBP47756 277 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 ILKQ13418 452 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 FAM71E1Q6IPT2 247 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 FAM46DQ8NEK8 389 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 HUS1BQ8NHY5 278 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 WDR48Q8TAF3 677 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 SLC5A11Q8WWX8 675 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 GGHQ92820 318 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 NAT6Q93015 286 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 UBE2E3Q969T4 207 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 SDHCQ99643 169 aaPredicted RBP7.27□□□□□ -1.24
CDKL5-202ENST00000379996 NIPSNAP1Q9BPW8 284 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 SPNS1Q9H2V7 528 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 POMT2Q9UKY4 750 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 LSM2Q9Y333 95 aaKnown RBP7.27□□□□□ -1.24
CDKL5-202ENST00000379996 TPRKBQ9Y3C4 175 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 UGT2A1Q9Y4X1 527 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 GMPPBQ9Y5P6 360 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 KCNE2Q9Y6J6 123 aa7.27□□□□□ -1.24
CDKL5-202ENST00000379996 C2orf74A8MZ97 194 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 PTGES3LE9PB15 166 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF682O95780 498 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 HNRNPCP07910 306 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CD40LGP29965 261 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 HBA1P69905 142 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CBX3Q13185 183 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 BCL2A1Q16548 175 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 SPIN4Q56A73 249 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 PLEKHG7Q6ZR37 379 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 PRSS42Q7Z5A4 293 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 TRIM73Q86UV7 250 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 KMT5CQ86Y97 462 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CACTIN-AS1Q8N1I8 211 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 RSC1A1Q92681 617 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 SLC38A4Q969I6 547 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 NEIL2Q969S2 332 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 REPS1Q96D71 796 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 OR2A14Q96R47 310 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 APOL4Q9BPW4 351 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ATG10Q9H0Y0 220 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 DSN1Q9H410 356 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 KRT84Q9NSB2 600 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 PCDHGB3Q9Y5G1 929 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 R4GN57 208 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 NUP214P35658 2090 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 MUC3AQ02505 3323 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 GNGT2O14610 69 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 PPM1DO15297 605 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 NOL3O60936 208 aaKnown RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 C1GALT1C1LP0DN25 315 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CXCR2P25025 360 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 RRM2P31350 389 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ARL1P40616 181 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 PIK3CBP42338 1070 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 RNF144AP50876 292 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 DUSP3P51452 185 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CRISP3P54108 245 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CSNK2BP67870 215 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ZNF542PQ5EBM4 170 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 REC114Q7Z4M0 266 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 OOSP2Q86WS3 158 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 TRIM48Q8IWZ4 208 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 SLC35F3Q8IY50 421 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 OR2L3Q8NG85 312 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 PSMA8Q8TAA3 256 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 LCN9Q8WX39 176 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 STARD8Q92502 1023 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 LGALS12Q96DT0 336 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ITPAQ9BY32 194 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 SRMSQ9H3Y6 488 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 SLC25A19Q9HC21 320 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ZBTB20Q9HC78 741 aaPredicted RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 HMG20AQ9NP66 347 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 MYNNQ9NPC7 610 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ACER3Q9NUN7 267 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 TOR4AQ9NXH8 423 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 QPCTLQ9NXS2 382 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 SELENONQ9NZV5 590 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CCDC59Q9P031 241 aaKnown RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CORO2BQ9UQ03 480 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 SAMHD1Q9Y3Z3 626 aaKnown RBP7.27□□□□□ -1.25
CDKL5-202ENST00000379996 DYRK1BQ9Y463 629 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 RNF215Q9Y6U7 377 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 CCDC88CQ9P219 2028 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 ABCA7Q8IZY2 2146 aa7.27□□□□□ -1.25
CDKL5-202ENST00000379996 LNP1A1A4G5 178 aa7.26□□□□□ -1.25
CDKL5-202ENST00000379996 BTN3A3O00478 584 aa7.26□□□□□ -1.25
CDKL5-202ENST00000379996 CDX4O14627 284 aaPredicted RBP7.26□□□□□ -1.25
CDKL5-202ENST00000379996 FFAR1O14842 300 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms