RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 BCAT2O15382 392 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 HCRTR2O43614 444 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 B3GALT4O96024 378 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 UGT2B7P16662 529 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 ADAM15Q13444 863 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 PRPF38BQ5VTL8 546 aaKnown RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 LYSMD4Q5XG99 296 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 ADNP2Q6IQ32 1131 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 NUP54Q7Z3B4 507 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 OR9A4Q8NGU2 314 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 TMEM203Q969S6 136 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 MTHFD2LQ9H903 347 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF624Q9P2J8 865 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 RBBP6Q7Z6E9 1792 aaKnown RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 A0A0G2JPF8 293 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 HNRNPCL3B7ZW38 293 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 FURINP09958 794 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 HNRNPCL4P0DMR1 293 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 ACVR2AP27037 513 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC9A3P48764 834 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 MVKQ03426 396 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 RNF111Q6ZNA4 994 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 SFTPA1Q8IWL2 248 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 ETFBKMTQ8IXQ9 262 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF433Q8N7K0 673 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC37A2Q8TED4 501 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 PPP1R14BQ96C90 147 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 KCNS3Q9BQ31 491 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 BEX2Q9BXY8 128 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 KLRF1Q9NZS2 232 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 WDR37Q9Y2I8 494 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 PGRMC2O15173 223 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 RPLP0P05388 317 aaKnown RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 ZC3H14Q6PJT7 736 aaKnown RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 FRRS1Q6ZNA5 592 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 FRMD1Q8N878 549 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 CCL4L1Q8NHW4 92 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 CHTF18Q8WVB6 975 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 LRRC3BQ96PB8 259 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 G6PC3Q9BUM1 346 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 FTSJ1Q9UET6 329 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 RARRES3Q9UL19 164 aa13.41□□□□□ -0.26
SHROOM1-203ENST00000378679 HYKKA2RU49 373 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 C5orf67F2Z3F1 127 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 AIFM1O95831 613 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 CBLP22681 906 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 MLLT10P55197 1068 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 TRA2BP62995 288 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 SLC27A4Q6P1M0 643 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 VWA5B2Q8N398 1253 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 TMEM151AQ8N4L1 468 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 AP3S1Q92572 193 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 GFM1Q96RP9 751 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 PELOQ9BRX2 385 aaKnown RBP13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 FOXQ1Q9C009 403 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 MAN2B2Q9Y2E5 1009 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 TNFRSF10CO14798 259 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 AQP9O43315 295 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 CLPXO76031 633 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 APOL3O95236 402 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 BMXP51813 675 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 CRISP1P54107 249 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 ST3GAL4Q11206 333 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 ANGPT1Q15389 498 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 SYPL1Q16563 259 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF550Q7Z398 422 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 CDRT4Q8N9R6 151 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 OR9Q2Q8NGE9 314 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 NR4A3Q92570 626 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 MS4A4EQ96PG1 132 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 OR52A5Q9H2C5 316 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 TNFRSF10DQ9UBN6 386 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 EPHA6Q9UF33 1036 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 C19orf25Q9UFG5 118 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 SPTBN2O15020 2390 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 C7orf72A4D263 438 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 ATE1O95260 518 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 JMJD7P0C870 316 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 RAB25P57735 213 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 REEP5Q00765 189 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 CD47Q08722 323 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 CDKN3Q16667 212 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 OSTF1Q92882 214 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 MSANTD3Q96H12 275 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 KIR3DX1Q9H7L2 352 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 ZNF696Q9H7X3 374 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 ZBTB20Q9HC78 741 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 ACSS1Q9NUB1 689 aaPredicted RBP13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 AASSQ9UDR5 926 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 MALT1Q9UDY8 824 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 MED16Q9Y2X0 877 aa13.4□□□□□ -0.26
SHROOM1-203ENST00000378679 LOC285556D6RIA3 1793 aa13.4□□□□□ -0.27
SHROOM1-203ENST00000378679 PLPP1O14494 284 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 CPNE3O75131 537 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 SRFP11831 508 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 TCF3P15923 654 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 XCR1P46094 333 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms