RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 WASHC1A8K0Z3 465 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 PRODHO43272 600 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 CYP7B1O75881 506 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 HMGN2P05204 90 aaKnown RBP17.12■□□□□ 0.33
TDP2-202ENST00000378198 TSPAN19P0C672 248 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 ARFIP1P53367 373 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 LASP1Q14847 261 aaKnown RBP17.12■□□□□ 0.33
TDP2-202ENST00000378198 ZNF79Q15937 498 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 DUSP6Q16828 381 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 RSBN1Q5VWQ0 802 aaPredicted RBP17.12■□□□□ 0.33
TDP2-202ENST00000378198 WASH2PQ6VEQ5 465 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 NRARPQ7Z6K4 114 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 MRGPREQ86SM8 312 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 FAM181AQ8N9Y4 354 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 OR2L8Q8NGY9 312 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 SMG7Q92540 1137 aaKnown RBP17.12■□□□□ 0.33
TDP2-202ENST00000378198 MSLNLQ96KJ4 702 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 YIPF4Q9BSR8 244 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 TPK1Q9H3S4 243 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 ASB4Q9Y574 426 aa17.12■□□□□ 0.33
TDP2-202ENST00000378198 SPIN1Q9Y657 262 aaPredicted RBP17.12■□□□□ 0.33
TDP2-202ENST00000378198 SYT5O00445 386 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 PRKRAO75569 313 aaKnown RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 PCDH8O95206 1070 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 KRT8P05787 483 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 FHP07954 510 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 BCL6P41182 706 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 HTR3AP46098 478 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 GAS1P54826 345 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 CAMK1Q14012 370 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 PLK5Q496M5 336 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 FAM78AQ5JUQ0 283 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 MRM1Q6IN84 353 aaKnown RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 SLC27A4Q6P1M0 643 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 HSDL2Q6YN16 418 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 KIF18BQ86Y91 864 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 MS4A6EQ96DS6 147 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 OTUB1Q96FW1 271 aaPredicted RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 ZNF486Q96H40 463 aaPredicted RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 MED18Q9BUE0 208 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 SAP130Q9H0E3 1048 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 NEK6Q9HC98 313 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 MRPS30Q9NP92 439 aaKnown RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 PRDM7Q9NQW5 492 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 CXXC1Q9P0U4 656 aaPredicted RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 THAP10Q9P2Z0 257 aaPredicted RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 ENTPD4Q9Y227 616 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 DOCK9Q9BZ29 2069 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 A0A1W2PR48 441 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 GLOD5A6NK44 160 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 ACP5P13686 325 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 HIST1H1TP22492 207 aaPredicted RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 TEAD1P28347 426 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 PKLRP30613 574 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 DRD3P35462 400 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 MXD1Q05195 221 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 GPR50Q13585 617 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 AGERQ15109 404 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 BAK1Q16611 211 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 CCDC92Q53HC0 331 aaPredicted RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 ZMAT1Q5H9K5 638 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 GJD3Q8N144 294 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 RNFT2Q96EX2 444 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 CNRIP1Q96F85 164 aaPredicted RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 KCTD7Q96MP8 289 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 SLC38A2Q96QD8 506 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 PLA2G12AQ9BZM1 189 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 OSGEPL1Q9H4B0 414 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 XKR8Q9H6D3 395 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 WDR26Q9H7D7 661 aa17.11■□□□□ 0.33
TDP2-202ENST00000378198 EXOSC1Q9Y3B2 195 aaKnown RBP17.11■□□□□ 0.33
TDP2-202ENST00000378198 A0A087WUU8 490 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 A8MU76 341 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 PLD2O14939 933 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 PGRMC2O15173 223 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 ERI3O43414 337 aaKnown RBP17.1■□□□□ 0.33
TDP2-202ENST00000378198 IL7P13232 177 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 SLC9A3P48764 834 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 TAS2R41P59536 307 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 LSM11P83369 360 aaKnown RBP eCLIP17.1■□□□□ 0.33
TDP2-202ENST00000378198 PRR5P85299 388 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 SCN1BQ07699 218 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 HYAL2Q12891 473 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 TPBGQ13641 420 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 TRAM2Q15035 370 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 GLYR1Q49A26 553 aaPredicted RBP17.1■□□□□ 0.33
TDP2-202ENST00000378198 MINDY4Q4G0A6 757 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 FLYWCH1Q4VC44 716 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 C22orf42Q6IC83 251 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 ABHD17CQ6PCB6 329 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 XKRXQ6PP77 449 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 HMGN2P46Q86SG4 172 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 RAB43Q86YS6 212 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 CCDC116Q8IYX3 515 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 ACOT4Q8N9L9 421 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 OR8K5Q8NH50 307 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 ARHGDIGQ99819 225 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 PRRG3Q9BZD7 231 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 MCOLN1Q9GZU1 580 aa17.1■□□□□ 0.33
TDP2-202ENST00000378198 EGLN3Q9H6Z9 239 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms