RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 C5P01031 1676 aa12.95□□□□□ -0.34
GPC6-201ENST00000377047 LAMP1P11279 417 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 ZNF43P17038 809 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CELP19835 753 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 MAN2A2P49641 1150 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 KIR2DS3Q14952 304 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 SH3BGRL2Q9UJC5 107 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 ERCC1P07992 297 aaPredicted RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 NDUFV2P19404 249 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 GNRHRP30968 328 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CTC1Q2NKJ3 1217 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 RPS26P11Q5JNZ5 115 aaPredicted RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 PNPLA1Q8N8W4 532 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 GALNT11Q8NCW6 608 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 NANOS1Q8WY41 292 aaKnown RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 L3HYPDHQ96EM0 354 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 MACROD1Q9BQ69 325 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 IL17CQ9P0M4 197 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 TMEM14AQ9Y6G1 99 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 AURKAO14965 403 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 BCAT2O15382 392 aaPredicted RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 LCTLQ6UWM7 567 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 THAP6Q8TBB0 222 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CASTOR1Q8WTX7 329 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 MAL2Q969L2 176 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 OR5B2Q96R09 309 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 UCKL1Q9NWZ5 548 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 PISDQ9UG56 409 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 H3BML4 177 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 POU3F4P49335 361 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 FXYD6P3P58550 94 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 MRPS21P82921 87 aaKnown RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 MLC1Q15049 377 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 BLOC1S3Q6QNY0 202 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 MCATQ8IVS2 390 aaKnown RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 MS4A4EQ96PG1 132 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 C2orf42Q9NWW7 574 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CPNE7Q9UBL6 633 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 TMX2-CTNND1H3BSU7 103 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 LIPKQ5VXJ0 399 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 TANGO2Q6ICL3 276 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 LHFPL3Q86UP9 236 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 ZNF675Q8TD23 568 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 SEC14L1Q92503 715 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 HOXB13Q92826 284 aaPredicted RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 RHBDF1Q96CC6 855 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 OR10A4Q9H209 315 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 FKBP14Q9NWM8 211 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 FXYD6-FXYD2A0A087WZ82 144 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CD3GP09693 182 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 GJA8P48165 433 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 HTR6P50406 440 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CLCN2P51788 898 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 EPHA4P54764 986 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 BNIP3Q12983 259 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 C6orf132Q5T0Z8 1188 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 PDSS2Q86YH6 399 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 OR8H3Q8N146 312 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CHCHD4Q8N4Q1 142 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 SLC41A3Q96GZ6 507 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 ZIC5Q96T25 663 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 CNN2Q99439 309 aaKnown RBP12.94□□□□□ -0.34
GPC6-201ENST00000377047 AIFM2Q9BRQ8 373 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 FXYD6Q9H0Q3 95 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 DNAJC15Q9Y5T4 150 aa12.94□□□□□ -0.34
GPC6-201ENST00000377047 MC3RP41968 323 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 POU4F2Q12837 409 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 ZNF789Q5FWF6 425 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 MPP7Q5T2T1 576 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 ENAMQ9NRM1 1142 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 FAM189A1O60320 539 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 EEF1A2Q05639 463 aaKnown RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 KDELC1Q6UW63 502 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 CEACAM19Q7Z692 300 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 DENND6BQ8NEG7 585 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TRMT10AQ8TBZ6 339 aaKnown RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 GATAD2BQ8WXI9 593 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 ATOH1Q92858 354 aaPredicted RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 KCNN1Q92952 543 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 CDH20Q9HBT6 801 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 NAALAD2Q9Y3Q0 740 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 SETD1AO15047 1707 aaKnown RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 ADAMTSL3P82987 1691 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 ABCB7O75027 752 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 ACVR1BP36896 505 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 E2F1Q01094 437 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TUBA3CQ13748 450 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 SFT2D3Q587I9 215 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 OR4K13Q8NH42 304 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 SORBS1Q9BX66 1292 aaKnown RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 DMRT3Q9NQL9 472 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TUBA8Q9NY65 449 aaPredicted RBP12.93□□□□□ -0.34
GPC6-201ENST00000377047 SCP2D1Q9UJQ7 156 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 VDAC3Q9Y277 283 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 TRBV2A0A0J9YWF9 115 aa12.93□□□□□ -0.34
GPC6-201ENST00000377047 LDB3O75112 727 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms