RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 ZNF860A6NHJ4 632 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 UBE2IP63279 158 aaKnown RBP20.36■□□□□ 0.85
RNF39-202ENST00000376751 SIM1P81133 766 aaPredicted RBP20.36■□□□□ 0.85
RNF39-202ENST00000376751 ST3GAL4Q11206 333 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 EIF2B5Q13144 721 aaKnown RBP20.36■□□□□ 0.85
RNF39-202ENST00000376751 IRF3Q14653 427 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 ZNF829Q3KNS6 432 aaPredicted RBP20.36■□□□□ 0.85
RNF39-202ENST00000376751 PTCHD4Q6ZW05 846 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 CROCCP3Q8IVE0 287 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 OR4N5Q8IXE1 308 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 TMEFF1Q8IYR6 380 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 SERINC2Q96SA4 455 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 GAS2L1Q99501 681 aaPredicted RBP20.36■□□□□ 0.85
RNF39-202ENST00000376751 SPATA5L1Q9BVQ7 753 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 PINK1Q9BXM7 581 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 CPNE7Q9UBL6 633 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 CYP8B1Q9UNU6 501 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 CORINQ9Y5Q5 1042 aa20.36■□□□□ 0.85
RNF39-202ENST00000376751 hCG_2014768A0A024R1R8 64 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 J3QRK9 145 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PTHP01270 115 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 SMIM11AP58511 58 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 ILKQ13418 452 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 GNA13Q14344 377 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 SUZ12Q15022 739 aaKnown RBP20.35■□□□□ 0.85
RNF39-202ENST00000376751 FBXO43Q4G163 708 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PRAMEF8Q5VWM4 474 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PRAMEF7Q5VXH5 474 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 SLX4IPQ5VYV7 408 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PRSS41Q7RTY9 318 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 LRRC25Q8N386 305 aaPredicted RBP20.35■□□□□ 0.85
RNF39-202ENST00000376751 FAM3CQ92520 227 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 SLC38A4Q969I6 547 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 FNDC11Q9BVV2 318 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PRR14Q9BWN1 585 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 POLR2J3Q9H1A7 115 aaKnown RBP20.35■□□□□ 0.85
RNF39-202ENST00000376751 PHF11Q9UIL8 331 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 NDRG2Q9UN36 371 aaKnown RBP20.35■□□□□ 0.85
RNF39-202ENST00000376751 GPR55Q9Y2T6 319 aaPredicted RBP20.35■□□□□ 0.85
RNF39-202ENST00000376751 SLCO1B1Q9Y6L6 691 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 TLR4O00206 839 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 FRS3O43559 492 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 SLITRK5O94991 958 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 TNFP01375 233 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 ADORA3P0DMS8 318 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 SOX18P35713 384 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 OPRL1P41146 370 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 RABIFP47224 123 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 XKP51811 444 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PPP1CAP62136 330 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 TARDBPQ13148 414 aaKnown RBP eCLIP20.35■□□□□ 0.85
RNF39-202ENST00000376751 VRK2Q86Y07 508 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 STX19Q8N4C7 294 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 FAM46DQ8NEK8 389 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 SLC35A4Q96G79 324 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PRRC1Q96M27 445 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 IL4I1Q96RQ9 567 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 ACTRT3Q9BYD9 372 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 DNAAF2Q9NVR5 837 aaKnown RBP20.35■□□□□ 0.85
RNF39-202ENST00000376751 NDOR1Q9UHB4 597 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 CHST2Q9Y4C5 530 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PMF1-BGLAPU3KQ54 211 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PRUNE2Q8WUY3 3088 aa20.35■□□□□ 0.85
RNF39-202ENST00000376751 PRAMEF26H0Y7S4 382 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 H0YGG7 62 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 CASC3O15234 703 aaKnown RBP20.34■□□□□ 0.85
RNF39-202ENST00000376751 ASNA1O43681 348 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 ARF3P61204 181 aaPredicted RBP20.34■□□□□ 0.85
RNF39-202ENST00000376751 TIGD6Q17RP2 521 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 KIAA0895LQ68EN5 471 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 C12orf73Q69YU5 71 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 SLCO6A1Q86UG4 719 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 ZNF761Q86XN6 746 aaPredicted RBP20.34■□□□□ 0.85
RNF39-202ENST00000376751 MORN4Q8NDC4 146 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 OR4K5Q8NGD3 323 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 DYNC2LI1Q8TCX1 351 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 SLC37A2Q8TED4 501 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 COL26A1Q96A83 441 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 TOE1Q96GM8 510 aaKnown RBP20.34■□□□□ 0.85
RNF39-202ENST00000376751 GPA33Q99795 319 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 ROGDIQ9GZN7 287 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 C2orf42Q9NWW7 574 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 GIN1Q9NXP7 522 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 DAPP1Q9UN19 280 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 TOR1BO14657 336 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 B3GALT2O43825 422 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 ENTPD6O75354 484 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 MMP11P24347 488 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 PDX1P52945 283 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 ID2Q02363 134 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 MFSD12Q6NUT3 480 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 ZER1Q7Z7L7 766 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 IQCHQ86VS3 1027 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 FNDC8Q8TC99 324 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 TRNT1Q96Q11 434 aaKnown RBP20.34■□□□□ 0.85
RNF39-202ENST00000376751 ARHGDIGQ99819 225 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 ZFYVE21Q9BQ24 234 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 CLN6Q9NWW5 311 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 NTMQ9P121 344 aa20.34■□□□□ 0.85
RNF39-202ENST00000376751 GON4LQ3T8J9 2241 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms