RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SF3B4Q15427 424 aaKnown RBP eCLIP19.24■□□□□ 0.67
VSX1-201ENST00000376707 SPNS3Q6ZMD2 512 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 LACC1Q8IV20 430 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 SLC22A9Q8IVM8 553 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 CDYL2Q8N8U2 506 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 ADCY4Q8NFM4 1077 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 TRIM44Q96DX7 344 aaPredicted RBP19.24■□□□□ 0.67
VSX1-201ENST00000376707 HSPBAP1Q96EW2 488 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 LCORQ96JN0 433 aaPredicted RBP19.24■□□□□ 0.67
VSX1-201ENST00000376707 PFDN4Q9NQP4 134 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 ZNF639Q9UID6 485 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 SLC6A5Q9Y345 797 aa19.24■□□□□ 0.67
VSX1-201ENST00000376707 AKAP9Q99996 3911 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 MANBAO00462 879 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 ACOX3O15254 700 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 BMP5P22003 454 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 UQCRC1P31930 480 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 WNT3P56703 355 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 TCHHL1Q5QJ38 904 aaPredicted RBP19.23■□□□□ 0.67
VSX1-201ENST00000376707 FAM219BQ5XKK7 198 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 TIGD3Q6B0B8 471 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 VASNQ6EMK4 673 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 ANGPTL8Q6UXH0 198 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 NUP54Q7Z3B4 507 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 LRRN4CLQ8ND94 238 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 TNIP2Q8NFZ5 429 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 OR52R1Q8NGF1 315 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 OR1J4Q8NGS1 313 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 OMA1Q96E52 524 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 L3HYPDHQ96EM0 354 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 LRRC46Q96FV0 321 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 PRDM14Q9GZV8 571 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 PRODH2Q9UF12 536 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 CAMK2AQ9UQM7 478 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 PLLPQ9Y342 182 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 NCKAP5O14513 1909 aa19.23■□□□□ 0.67
VSX1-201ENST00000376707 ANKRD17O75179 2603 aaKnown RBP19.22■□□□□ 0.67
VSX1-201ENST00000376707 GOLGA8RI6L899 631 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 CBX7O95931 251 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 IL2RAP01589 272 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 PYGBP11216 843 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 PTPN6P29350 595 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 HMOX2P30519 316 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 CEACAM8P31997 349 aaPredicted RBP19.22■□□□□ 0.67
VSX1-201ENST00000376707 TIMP3P35625 211 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 PEX19P40855 299 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 KIR2DL3P43628 341 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 DUSP2Q05923 314 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 CSTF3Q12996 717 aaKnown RBP19.22■□□□□ 0.67
VSX1-201ENST00000376707 LTB4RQ15722 352 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 TRMT12Q53H54 448 aaKnown RBP19.22■□□□□ 0.67
VSX1-201ENST00000376707 EIPR1Q53HC9 387 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 WIPI1Q5MNZ9 446 aaPredicted RBP19.22■□□□□ 0.67
VSX1-201ENST00000376707 FAM180BQ6P0A1 224 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 GPRIN3Q6ZVF9 776 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 ZZZ3Q8IYH5 903 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 RELL2Q8NC24 303 aaPredicted RBP19.22■□□□□ 0.67
VSX1-201ENST00000376707 NAXEQ8NCW5 288 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 SIMC1Q8NDZ2 872 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 CTHRC1Q96CG8 243 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 CNRIP1Q96F85 164 aaPredicted RBP19.22■□□□□ 0.67
VSX1-201ENST00000376707 OSBPL11Q9BXB4 747 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 KLRF1Q9NZS2 232 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 DCDC2Q9UHG0 476 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 MCM8Q9UJA3 840 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 UTS2RQ9UKP6 389 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 STK38LQ9Y2H1 464 aa19.22■□□□□ 0.67
VSX1-201ENST00000376707 KDM4EB2RXH2 506 aaPredicted RBP19.21■□□□□ 0.67
VSX1-201ENST00000376707 SYT5O00445 386 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 PCSK2P16519 638 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 BMP7P18075 431 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 GCKP35557 465 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 ASCL1P50553 236 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 RIPPLY3P57055 190 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 DCAF7P61962 342 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 MRPS35P82673 323 aaKnown RBP19.21■□□□□ 0.67
VSX1-201ENST00000376707 LCP2Q13094 533 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 SNTB1Q13884 538 aaKnown RBP19.21■□□□□ 0.67
VSX1-201ENST00000376707 NHSL2Q5HYW2 709 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 DESI1Q6ICB0 168 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 SLC30A6Q6NXT4 461 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 TMEM81Q6P7N7 255 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 SH2D5Q6ZV89 423 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 GSPT2Q8IYD1 628 aaKnown RBP19.21■□□□□ 0.67
VSX1-201ENST00000376707 METTL6Q8TCB7 284 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 HGDQ93099 445 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 ABTB1Q969K4 478 aaPredicted RBP19.21■□□□□ 0.67
VSX1-201ENST00000376707 ZNF681Q96N22 645 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 TRIB1Q96RU8 372 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 NODALQ96S42 347 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 UGT2B28Q9BY64 529 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 DNAJB12Q9NXW2 375 aaKnown RBP19.21■□□□□ 0.67
VSX1-201ENST00000376707 EHD3Q9NZN3 535 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 ZNF629Q9UEG4 869 aaPredicted RBP19.21■□□□□ 0.67
VSX1-201ENST00000376707 TBK1Q9UHD2 729 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 NINQ8N4C6 2090 aa19.21■□□□□ 0.67
VSX1-201ENST00000376707 GNG14A0A1W2PPG7 69 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 PCDH7O60245 1069 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 ICOSLGO75144 302 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 ULK1O75385 1050 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms