RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 SLC22A3O75751 556 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 RASAL1O95294 804 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SERPINA5P05154 406 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 DTYMKP23919 212 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 CCR7P32248 378 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 MMP13P45452 471 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 PDK2Q15119 407 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 PARP6Q2NL67 630 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 DACT2Q5SW24 774 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 GLYATL3Q5SZD4 288 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 KCTD20Q7Z5Y7 419 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 OR4M1Q8NGD0 313 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 OR1L3Q8NH93 324 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 STAG3L4Q8TBR4 150 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 MGLLQ99685 303 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 GPATCH2LQ9NWQ4 482 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SLC6A5Q9Y345 797 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 URGCP-MRPS24S4R325 110 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 HECW1Q76N89 1606 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 UPK1BO75841 260 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 MT-CO1P00395 513 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FBLP22087 321 aaKnown RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 PCSK1P29120 753 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 EPHA2P29317 976 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 GPR85P60893 370 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 PRRT3Q5FWE3 981 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 OR1N2Q8NGR9 330 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 TAS1R2Q8TE23 839 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FUCA2Q9BTY2 467 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 TREHO43280 583 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF749O43361 778 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 HTR1AP08908 422 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FAM86B2P0C5J1 330 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 OTX2P32243 289 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SRSF9Q13242 221 aaKnown RBP eCLIP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 BAATQ14032 418 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 MSMO1Q15800 293 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 C10orf120Q5SQS8 335 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 C6orf141Q5SZD1 244 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF620Q6ZNG0 422 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 USP53Q70EK8 1073 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 KCNMB4Q86W47 210 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FAM131BQ86XD5 332 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 BEND7Q8N7W2 519 aaPredicted RBP5.71□□□□□ -1.5
SCN2A-202ENST00000375427 FADS6Q8N9I5 356 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ACSS3Q9H6R3 686 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 ISYNA1Q9NPH2 558 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 SPO11Q9Y5K1 396 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 BACE2Q9Y5Z0 518 aa5.71□□□□□ -1.5
SCN2A-202ENST00000375427 RTEL1-TNFRSF6BF6WH68 1400 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 OR5K4A6NMS3 321 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 PER1O15534 1290 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 EEF1E1O43324 174 aaKnown RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF25P17030 456 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 ADRA1DP25100 572 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 ADORA1P30542 326 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 RHBDL3P58872 404 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM35AQ53FP2 167 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 OR2G6Q5TZ20 316 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 SEPT12Q8IYM1 358 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 VWA5B2Q8N398 1253 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 GMCL1P1Q8NEA9 526 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 OR52L2PQ8NGH6 319 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 LILRB4Q8NHJ6 448 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 TMEM117Q9H0C3 514 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 ZFP14Q9HCL3 533 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 HHATLQ9HCP6 504 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 XDHP47989 1333 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 A0A087X0M5 115 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 A0A0B4J293 547 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 A0A1B0GX30 115 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 CASTOR2A6NHX0 329 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 GABRR3A8MPY1 467 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 LGALS8O00214 317 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 SLC22A5O76082 557 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 TK1P04183 234 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 CTSSP25774 331 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 EMP2P54851 167 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 OR10A3P58181 314 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 FAM174BQ3ZCQ3 159 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 ADGRD1Q6QNK2 874 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 ANKRD23Q86SG2 305 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 TRAPPC6BQ86SZ2 158 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 RGL4Q8IZJ4 473 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 MUC15Q8N387 334 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 B3GNT7Q8NFL0 401 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 OR5L1Q8NGL2 311 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 RBM17Q96I25 401 aaKnown RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 DCLRE1CQ96SD1 692 aaKnown RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 FDXACB1Q9BRP7 624 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 NMNAT2Q9BZQ4 307 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 PRDM12Q9H4Q4 367 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 MTHFD2LQ9H903 347 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 S100A14Q9HCY8 104 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 SPATA6Q9NWH7 488 aaPredicted RBP5.7□□□□□ -1.5
SCN2A-202ENST00000375427 ZIM2Q9NZV7 527 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 PCYOX1Q9UHG3 505 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 SERTM2A0A1B0GWG4 89 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 USP17L5A8MUK1 530 aa5.7□□□□□ -1.5
SCN2A-202ENST00000375427 USP17L15C9J2P7 530 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms