RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 YIPF7Q8N8F6 280 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 OR2T33Q8NG76 320 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 RHBDD1Q8TEB9 315 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 SLC6A18Q96N87 628 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 SECISBP2Q96T21 854 aaKnown RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 CNIH4Q9P003 139 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 NPIPA1Q9UND3 350 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 PLCL2Q9UPR0 1127 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 BCAT2O15382 392 aaPredicted RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 PROM1O43490 865 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 B4GAT1O43505 415 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 TCTN1Q2MV58 587 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 OR51L1Q8NGJ5 315 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 TMEM80Q96HE8 168 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 SPATA9Q9BWV2 254 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 TMEM5Q9Y2B1 443 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 SLC22A1O15245 554 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 CDRT1O95170 752 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 GNAO1P09471 354 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF41P51814 821 aaPredicted RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 TMEM52BQ4KMG9 183 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 CPZQ66K79 652 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 PGM2L1Q6PCE3 622 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 SH2D5Q6ZV89 423 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 USP43Q70EL4 1123 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 METTL4Q8N3J2 472 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 OR2L3Q8NG85 312 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 RNASE11Q8TAA1 199 aaKnown RBP16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 TESCQ96BS2 214 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ASPNQ9BXN1 380 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 ANKRA2Q9H9E1 313 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 GNG8Q9UK08 70 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 RNF6Q9Y252 685 aa16.99■□□□□ 0.31
PTPDC1-202ENST00000375360 A0A1B0GTL3 188 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 FZD6O60353 706 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 FCER2P06734 321 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 DCNP07585 359 aaKnown RBP16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 TUBA4AP68366 448 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 VEZF1Q14119 521 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 TMEM225Q6GV28 225 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 ERI1Q8IV48 349 aaKnown RBP16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF300Q96RE9 604 aaPredicted RBP16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 LYSMD1Q96S90 227 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 TMEM121BQ9BXQ6 578 aaPredicted RBP16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 TRPV5Q9NQA5 729 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 RIMS3Q9UJD0 308 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 CDC14CA4D256 554 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 HK1P19367 917 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 MAT1AQ00266 395 aaKnown RBP16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 MAP4K2Q12851 820 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 OR8J1Q8NGP2 316 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 HCAR2Q8TDS4 363 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 COQ8BQ96D53 544 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 CRELD1Q96HD1 420 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 MAGIXQ9H6Y5 334 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF222Q9UK12 451 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 RBM7Q9Y580 266 aaKnown RBP16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 YPEL5P62699 121 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 PPP3R1P63098 170 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 RAB39AQ14964 217 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 UGT8Q16880 541 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 LIPKQ5VXJ0 399 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 BTN2A1Q7KYR7 527 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 KRT77Q7Z794 578 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF583Q96ND8 569 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 QSER1Q2KHR3 1735 aa16.98■□□□□ 0.31
PTPDC1-202ENST00000375360 A0A0G2JPF8 293 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 SLC5A10A0PJK1 596 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 C17orf105B2RV13 164 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 HNRNPCL3B7ZW38 293 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 HNRNPCL4P0DMR1 293 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 RORAP35398 523 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 C18orf63Q68DL7 685 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 SHFQ7M4L6 423 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 SERPINA11Q86U17 422 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 CCL4L1Q8NHW4 92 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 TBC1D29Q9UFV1 150 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 SLC23A2Q9UGH3 650 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 A0A1W2PPK0 400 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 RORCP51449 518 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 PMS2P3Q13401 168 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 PUS10Q3MIT2 529 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 CWF19L1Q69YN2 538 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 ZFP41Q8N8Y5 198 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 CDRT4Q8N9R6 151 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 OR2L8Q8NGY9 312 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 CNDP2Q96KP4 475 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 GFM1Q96RP9 751 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 FOXQ1Q9C009 403 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 STRADBQ9C0K7 418 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 POLR1CO15160 346 aaPredicted RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 PLPP6Q8IY26 295 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 OR6N2Q8NGY6 317 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 OR8K3Q8NH51 312 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 CDS1Q92903 461 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 BCL2L14Q9BZR8 327 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 QRSL1Q9H0R6 528 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 NANSQ9NR45 359 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 TRNAU1APQ9NX07 287 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms