RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TPRKBQ9Y3C4 175 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 SNX5Q9Y5X3 404 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 LGI1O95970 557 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 H1F0P07305 194 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 PORP16435 677 aaPredicted RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 SH3BGRP55822 239 aaPredicted RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 SHC2P98077 582 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 GKN2Q86XP6 184 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 GJD3Q8N144 294 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 CA13Q8N1Q1 262 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 PARP8Q8N3A8 854 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 CNDP2Q96KP4 475 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 TRNT1Q96Q11 434 aaKnown RBP18.37■□□□□ 0.53
HDAC1-201ENST00000373548 NELL2Q99435 816 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 RHNO1Q9BSD3 238 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 ERVK-18Q9QC07 812 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 A4GNTQ9UNA3 340 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 LIPT1Q9Y234 373 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 DSPPQ9NZW4 1301 aa18.37■□□□□ 0.53
HDAC1-201ENST00000373548 COL6A3P12111 3177 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 THADAQ6YHU6 1953 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 FGF17O60258 216 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 LDB3O75112 727 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 PCMT1P22061 227 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 ROR2Q01974 943 aaKnown RBP18.36■□□□□ 0.53
HDAC1-201ENST00000373548 CHRNEQ04844 493 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 KLHL17Q6TDP4 642 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 ARHGEF39Q8N4T4 335 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 AVL9Q8NBF6 648 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 SLC16A11Q8NCK7 471 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 ZNF420Q8TAQ5 688 aaPredicted RBP18.36■□□□□ 0.53
HDAC1-201ENST00000373548 FAM81AQ8TBF8 368 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 HSPA12BQ96MM6 686 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 CDX2Q99626 313 aaPredicted RBP18.36■□□□□ 0.53
HDAC1-201ENST00000373548 DOK1Q99704 481 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 FUZQ9BT04 418 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 CCDC90BQ9GZT6 254 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 NAA50Q9GZZ1 169 aaKnown RBP18.36■□□□□ 0.53
HDAC1-201ENST00000373548 SCN3BQ9NY72 215 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 TMCC3Q9ULS5 477 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 DOLKQ9UPQ8 538 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 SLC9A8Q9Y2E8 581 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 SPACA6W5XKT8 324 aa18.36■□□□□ 0.53
HDAC1-201ENST00000373548 SLC9B1P1A6NJY1 282 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 ZIC2O95409 532 aaPredicted RBP18.35■□□□□ 0.53
HDAC1-201ENST00000373548 PIN1Q13526 163 aaPredicted RBP18.35■□□□□ 0.53
HDAC1-201ENST00000373548 ZNF628Q5EBL2 1059 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 ATAD3BQ5T9A4 648 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 CDC73Q6P1J9 531 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 C16orf62Q7Z3J2 963 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 ERI1Q8IV48 349 aaKnown RBP18.35■□□□□ 0.53
HDAC1-201ENST00000373548 SPEM1Q8N4L4 309 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 OR6T1Q8NGN1 323 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 ADAMTS15Q8TE58 950 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 ZG16BQ96DA0 208 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 PINK1Q9BXM7 581 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 PTGFRNQ9P2B2 879 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 SPAG17Q6Q759 2223 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 EML5Q05BV3 1969 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 SGK494L7N484 410 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 CASC3O15234 703 aaKnown RBP18.35■□□□□ 0.53
HDAC1-201ENST00000373548 FAM20BO75063 409 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 TUBA3CQ13748 450 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 FAM214AQ32MH5 1076 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 TRMT12Q53H54 448 aaKnown RBP18.35■□□□□ 0.53
HDAC1-201ENST00000373548 DCST1Q5T197 706 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 FHL5Q5TD97 284 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 HEPHL1Q6MZM0 1159 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 KLHL35Q6PF15 583 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 MCATQ8IVS2 390 aaKnown RBP18.35■□□□□ 0.53
HDAC1-201ENST00000373548 MUL1Q969V5 352 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 CALML5Q9NZT1 146 aa18.35■□□□□ 0.53
HDAC1-201ENST00000373548 FAAHO00519 579 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 ITIH1P19827 911 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 CAPZBP47756 277 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 NPTX1Q15818 432 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 NLGN4XQ8N0W4 816 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 C1orf216Q8TAB5 229 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 DOK4Q8TEW6 326 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 CDS1Q92903 461 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 MAP3K3Q99759 626 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 UCK1Q9HA47 277 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 PCDHGB1Q9Y5G3 927 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 TP53BP1Q12888 1972 aaPredicted RBP18.34■□□□□ 0.53
HDAC1-201ENST00000373548 LILRA5A6NI73 299 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 DUXAA6NLW8 204 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 H3BMQ9 156 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 RDH16O75452 317 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 OXSR1O95747 527 aaPredicted RBP18.34■□□□□ 0.53
HDAC1-201ENST00000373548 GPR75O95800 540 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 ADAP00813 363 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 ATP1B1P05026 303 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 ALPPP05187 535 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 PROS1P07225 676 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 IDH2P48735 452 aaKnown RBP18.34■□□□□ 0.53
HDAC1-201ENST00000373548 PDX1P52945 283 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 SMIM11AP58511 58 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 EMX1Q04741 257 aaPredicted RBP18.34■□□□□ 0.53
HDAC1-201ENST00000373548 ZNF311Q5JNZ3 666 aa18.34■□□□□ 0.53
HDAC1-201ENST00000373548 VRK2Q86Y07 508 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms