RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 OR52E2Q8NGJ4 325 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 JPH3Q8WXH2 748 aaPredicted RBP10.99□□□□□ -0.65
VCL-202ENST00000372755 C22orf15Q8WYQ4 148 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 ABCG5Q9H222 651 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 FTSJ1Q9UET6 329 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 MT-CO2P00403 227 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 ALDH3B2P48448 385 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 GATMP50440 423 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 LUMP51884 338 aaPredicted RBP10.99□□□□□ -0.65
VCL-202ENST00000372755 ZNF616Q08AN1 781 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 MFSD13AQ14CX5 517 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 KANK2Q63ZY3 851 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 TRAPPC6BQ86SZ2 158 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 GCDHQ92947 438 aaPredicted RBP10.99□□□□□ -0.65
VCL-202ENST00000372755 BCAS3Q9H6U6 928 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 VRTNQ9H8Y1 702 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 ACOT13Q9NPJ3 140 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 NAALAD2Q9Y3Q0 740 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 FEZF1A0PJY2 475 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 JRKO75564 520 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 RAB3BP20337 219 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 SNU13P55769 128 aaKnown RBP10.99□□□□□ -0.65
VCL-202ENST00000372755 SF3B4Q15427 424 aaKnown RBP eCLIP10.99□□□□□ -0.657e-7■■■■□ 26.7
VCL-202ENST00000372755 AWAT2Q6E213 333 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 TSPAN33Q86UF1 283 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 SCML4Q8N228 414 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 PELI2Q9HAT8 420 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 KLHL13Q9P2N7 655 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 OR1A2Q9Y585 309 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 A0A0A6YYH2 397 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 A6NJ64 397 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 CPNE6O95741 557 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 CLCN2P51788 898 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 LARP4Q71RC2 724 aaKnown RBP eCLIP10.99□□□□□ -0.65
VCL-202ENST00000372755 DIO2Q92813 273 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 LGALS12Q96DT0 336 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 MTHFD2LQ9H903 347 aaPredicted RBP10.99□□□□□ -0.65
VCL-202ENST00000372755 KCNK13Q9HB14 408 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 CDH20Q9HBT6 801 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 WDR6Q9NNW5 1121 aaKnown RBP10.99□□□□□ -0.65
VCL-202ENST00000372755 MAN2C1Q9NTJ4 1040 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 FAM118AQ9NWS6 357 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 EEF1E1-BLOC1S5C9J1V9 151 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 PRAMEF2O60811 474 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 C5AR1P21730 350 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 GPR4P46093 362 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 BLOC1S3Q6QNY0 202 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 TMEM151AQ8N4L1 468 aa10.99□□□□□ -0.65
VCL-202ENST00000372755 HHLA1C9JL84 531 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 SEC14L5O43304 696 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 STSP08842 583 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 C1orf61Q13536 156 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 APOFQ13790 326 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 HUS1BQ8NHY5 278 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 ASB15Q8WXK1 588 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 DDX1Q92499 740 aaKnown RBP10.98□□□□□ -0.65
VCL-202ENST00000372755 IGSF8Q969P0 613 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 MSANTD3Q96H12 275 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 RADILQ96JH8 1075 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 GHRLQ9UBU3 117 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 IGLON5A6NGN9 336 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 SYPP08247 313 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 OR8U9P0C7N5 309 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 HLCSP50747 726 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 HNRNPKP61978 463 aaKnown RBP eCLIP10.98□□□□□ -0.65
VCL-202ENST00000372755 NIPAL4Q0D2K0 466 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 SLC22A10Q63ZE4 541 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 FIGNL1Q6PIW4 674 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 PDZD9Q8IXQ8 264 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 LILRB2Q8N423 598 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 WDSUB1Q8N9V3 476 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 OR56B2PQ8NGI1 322 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 OR5AK2Q8NH90 309 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 SPTSSAQ969W0 71 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 IL17FQ96PD4 163 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 HINT2Q9BX68 163 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 ZBTB20Q9HC78 741 aaPredicted RBP10.98□□□□□ -0.65
VCL-202ENST00000372755 KLHL9Q9P2J3 617 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 MYOCOSA0A1B0GUC4 107 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 TRAPPC13A5PLN9 417 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 MEGF11A6BM72 1044 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 HEPACAM2A8MVW5 462 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 FMO6PO60774 539 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 LPLP06858 475 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 CHMP24386 653 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 HAVCR2Q8TDQ0 301 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 ZFAND2BQ8WV99 257 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 FOXJ1Q92949 421 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 TMEM246Q9BRR3 403 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 ACTRT3Q9BYD9 372 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 EFCAB7A8K855 629 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 FZD9O00144 591 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 C6P13671 934 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 GGT1P19440 569 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 RAB31Q13636 194 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 RAB41Q5JT25 222 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 VASH1Q7L8A9 365 aaPredicted RBP10.98□□□□□ -0.65
VCL-202ENST00000372755 OR52N2Q8NGI0 321 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 ECHDC3Q96DC8 303 aa10.98□□□□□ -0.65
VCL-202ENST00000372755 MPPED1O15442 326 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms