RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CLDN22Q8N7P3 220 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 CREB3L4Q8TEY5 395 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 SLC9A6Q92581 669 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 RSPRY1Q96DX4 576 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 PLA2G12AQ9BZM1 189 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 EGLN3Q9H6Z9 239 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 BCL2L10Q9HD36 194 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 A0A1W2PQL4 384 aaPredicted RBP18.03■□□□□ 0.48
TMEM53-202ENST00000372237 CLEC3AO75596 197 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 CLEC2LP0C7M8 214 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 MSL3P1P0C860 447 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 ANXA11P50995 505 aaKnown RBP18.03■□□□□ 0.48
TMEM53-202ENST00000372237 EFNB1P98172 346 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 NDUFA5Q16718 116 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 GPAT3Q53EU6 434 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 C3orf38Q5JPI3 329 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 RAB42Q8N4Z0 105 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 SUN3Q8TAQ9 357 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 C1GALT1C1Q96EU7 318 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 DIRAS2Q96HU8 199 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 KCTD7Q96MP8 289 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 FERD3LQ96RJ6 166 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 MARCH7Q9H992 704 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 ZDHHC4Q9NPG8 344 aa18.03■□□□□ 0.48
TMEM53-202ENST00000372237 COL4A3Q01955 1670 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 LRIT2A6NDA9 550 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 SNTNA6NMZ2 147 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 C1QTNF3-AMACRE9PGA6 284 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 IDH3BO43837 385 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 STATHP02808 62 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 HNRNPA1P09651 372 aaKnown RBP eCLIP18.02■□□□□ 0.48
TMEM53-202ENST00000372237 ACP2P11117 423 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 TCEA1P23193 301 aaKnown RBP18.02■□□□□ 0.48
TMEM53-202ENST00000372237 TAS2R38P59533 333 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 FUT5Q11128 374 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 RAB40BQ12829 278 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 CAMK1Q14012 370 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 GNA13Q14344 377 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 SLC9A5Q14940 896 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 FLYWCH1Q4VC44 716 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 MEX3DQ86XN8 651 aaKnown RBP18.02■□□□□ 0.48
TMEM53-202ENST00000372237 KIF18BQ86Y91 864 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 GATAD2AQ86YP4 633 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 TEX47Q8TBZ9 253 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 HERVK_113Q902F9 699 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 FGF11Q92914 225 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 RNFT2Q96EX2 444 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 DDX28Q9NUL7 540 aaKnown RBP18.02■□□□□ 0.48
TMEM53-202ENST00000372237 PLEKHB1Q9UF11 243 aaPredicted RBP18.02■□□□□ 0.48
TMEM53-202ENST00000372237 GPR52Q9Y2T5 361 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 YARS2Q9Y2Z4 477 aaKnown RBP18.02■□□□□ 0.48
TMEM53-202ENST00000372237 N6AMT1Q9Y5N5 214 aa18.02■□□□□ 0.48
TMEM53-202ENST00000372237 GOLGA4Q13439 2230 aaKnown RBP18.02■□□□□ 0.48
TMEM53-202ENST00000372237 FABP12A6NFH5 140 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 OTOL1A6NHN0 477 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 MAN2B1O00754 1011 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 TFECO14948 347 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 PRODHO43272 600 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 HMGN2P05204 90 aaKnown RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 S100A1P23297 94 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 SLC9A3P48764 834 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 PLK5Q496M5 336 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 GLYR1Q49A26 553 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 SLC27A4Q6P1M0 643 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 BHLHB9Q6PI77 547 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 SLC36A4Q6YBV0 504 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 TMEM163Q8TC26 289 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 PHOSPHO2Q8TCD6 241 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 GATAD2BQ8WXI9 593 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 MSLNLQ96KJ4 702 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 OR2B2Q9GZK3 357 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 QRSL1Q9H0R6 528 aaKnown RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 TMEM245Q9H330 911 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 IGKV1-8A0A0C4DH67 115 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 LINC01553A4QN01 128 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 IGLON5A6NGN9 336 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 STK25O00506 426 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 CASC3O15234 703 aaKnown RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 SDC2P34741 201 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 UBE3AQ05086 875 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 PRDX1Q06830 199 aaKnown RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 PDZK1Q5T2W1 519 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 DDI2Q5TDH0 399 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 XKRXQ6PP77 449 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 C11orf74Q86VG3 221 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 TM9SF4Q92544 642 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 C12orf66Q96MD2 445 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 MACROD1Q9BQ69 325 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 AICDAQ9GZX7 198 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 SAP130Q9H0E3 1048 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 MIXL1Q9H2W2 232 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 OSGEPL1Q9H4B0 414 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 KLHL31Q9H511 634 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 TOR4AQ9NXH8 423 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 TRPM6Q9BX84 2022 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 CHD9Q3L8U1 2897 aa18.01■□□□□ 0.47
TMEM53-202ENST00000372237 RANBP2P49792 3224 aaKnown RBP18.01■□□□□ 0.47
TMEM53-202ENST00000372237 DENND4AQ7Z401 1863 aa18■□□□□ 0.47
TMEM53-202ENST00000372237 A0A087WUU8 490 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms