RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CTSVO60911 334 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 KLF7O75840 302 aaPredicted RBP9.76□□□□□ -0.85
COL5A1-202ENST00000371820 CLPXO76031 633 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 ALPPP05187 535 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 EIF2S1P05198 315 aaKnown RBP9.76□□□□□ -0.85
COL5A1-202ENST00000371820 GNAO1P09471 354 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 ALOX5P09917 674 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 DNAJA1P31689 397 aaKnown RBP9.76□□□□□ -0.85
COL5A1-202ENST00000371820 GCGRP47871 477 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 MLLT10P55197 1068 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 PHEXP78562 749 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 TAP2Q03519 686 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 PCDH1Q08174 1060 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 CHAF1BQ13112 559 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 DGUOKQ16854 277 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 FAM174BQ3ZCQ3 159 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 ZNF691Q5VV52 312 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 GARNL3Q5VVW2 1013 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 CPZQ66K79 652 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 SCIMPQ6UWF3 145 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 OVCH1Q7RTY7 1134 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 ADCK2Q7Z695 626 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 MRGPREQ86SM8 312 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 TSPYL5Q86VY4 417 aaPredicted RBP9.76□□□□□ -0.85
COL5A1-202ENST00000371820 OR10A6Q8NH74 314 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 FCGR1BQ92637 280 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 VMP1Q96GC9 406 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 ZNF347Q96SE7 839 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 SLC26A1Q9H2B4 701 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 ZNF304Q9HCX3 659 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 SLC6A20Q9NP91 592 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 FAM120CQ9NX05 1096 aaKnown RBP9.76□□□□□ -0.85
COL5A1-202ENST00000371820 GPR83Q9NYM4 423 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 GIMAP2Q9UG22 337 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 IKZF3Q9UKT9 509 aa9.76□□□□□ -0.85
COL5A1-202ENST00000371820 RUVBL1Q9Y265 456 aaKnown RBP9.76□□□□□ -0.85
COL5A1-202ENST00000371820 TRBV5-3A0A0A0MS03 114 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 A0A1B0GVG6 124 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 KRT87PA6NCN2 255 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 A8MVJ9 347 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 ZNF99A8MXY4 864 aaPredicted RBP9.75□□□□□ -0.85
COL5A1-202ENST00000371820 CEACAM4O75871 244 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 PRKD3O94806 890 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 BCKDHAP12694 445 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 IMPA1P29218 277 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 HNF4AP41235 474 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 MAGEA2P43356 314 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 MTPNP58546 118 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 TUBA1BP68363 451 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 TEKQ02763 1124 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 KRR1Q13601 381 aaKnown RBP9.75□□□□□ -0.85
COL5A1-202ENST00000371820 ATP1A4Q13733 1029 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 SLC9A5Q14940 896 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 NDUFA9Q16795 377 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 PRAMEF13Q5VWM6 474 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 FRMPD2BQ6IN97 320 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 ZNF425Q6IV72 752 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 TMEM214Q6NUQ4 689 aaKnown RBP9.75□□□□□ -0.85
COL5A1-202ENST00000371820 TUBA1AQ71U36 451 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 PIWIL3Q7Z3Z3 882 aaKnown RBP9.75□□□□□ -0.85
COL5A1-202ENST00000371820 PAQR7Q86WK9 346 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 SLC30A8Q8IWU4 369 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 SPARTQ8N0X7 666 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 NATD1Q8N6N6 113 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 CSNK1A1LQ8N752 337 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 TBC1D15Q8TC07 691 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 RORBQ92753 470 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 NCLNQ969V3 563 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 REPS1Q96D71 796 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 FBXL20Q96IG2 436 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 PLEKHA8Q96JA3 519 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 PSMG3-AS1Q96PY0 264 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 TOR3AQ9H497 397 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 BRF2Q9HAW0 419 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 IL1RAPQ9NPH3 570 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 SEMA3GQ9NS98 782 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 TMEM184CQ9NVA4 438 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 DNAJC11Q9NVH1 559 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 ARL15Q9NXU5 204 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 VAPAQ9P0L0 249 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 SLAMF8Q9P0V8 285 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 C5AR2Q9P296 337 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 STOX2Q9P2F5 926 aaPredicted RBP9.75□□□□□ -0.85
COL5A1-202ENST00000371820 NAALAD2Q9Y3Q0 740 aa9.75□□□□□ -0.85
COL5A1-202ENST00000371820 SPTBN1Q01082 2364 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 MYOCOSA0A1B0GUC4 107 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 CLDN25C9JDP6 229 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 H0YGG7 62 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 RFXANKO14593 260 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 PCDH17O14917 1159 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 HS6ST1O60243 411 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ATE1O95260 518 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 GUCA1CO95843 209 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 IFNA14P01570 189 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 CTSBP07858 339 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 HNRNPCP07910 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ABCB1P08183 1280 aaPredicted RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ATXN8OSP0DMR3 200 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 IMPDH2P12268 514 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms