RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 KCNIP2Q9NS61 270 aa14.6□□□□□ -0.07
COL5A1-201ENST00000371817 G0S2P27469 103 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 RPL13AP40429 203 aaKnown RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 GAB3Q8WWW8 586 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 KCNJ9Q92806 393 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PGAP3Q96FM1 320 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ANKUB1A6NFN9 424 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ARSJQ5FYB0 599 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 TMEM173Q86WV6 379 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 KDM1BQ8NB78 822 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 EVLQ9UI08 416 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 KLHL21Q9UJP4 597 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PRR36Q9H6K5 1346 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 LOC105369274A0A096LPK9 316 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 HLA-HP01893 362 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 HBE1P02100 147 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PRNPP04156 253 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 BAK1Q16611 211 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 C11orf91Q3C1V1 193 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 NOXRED1Q6NXP6 359 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 OR4N4Q8N0Y3 316 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 OR4E2Q8NGC2 313 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PHOSPHO1Q8TCT1 267 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PSMG2Q969U7 264 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 NCDNQ9UBB6 729 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 TCRBV7S3A2A0A539 114 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PHYHO14832 338 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 NFYAP23511 347 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF33AQ06730 810 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 CST9LP1Q5W188 147 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ABHD5Q8WTS1 349 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 NDRG1Q92597 394 aaKnown RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 GATA6Q92908 595 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 KCNA7Q96RP8 456 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 HAPLN3Q96S86 360 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PAPOLGQ9BWT3 736 aaKnown RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 TP53BP1Q12888 1972 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 SOX1O00570 391 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ACPPP15309 386 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 LRFN4Q6PJG9 635 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 OR10Z1Q8NGY1 313 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 TXNDC15Q96J42 360 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 KCNH6Q9H252 994 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 METTL17Q9H7H0 456 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 SLC28A3Q9HAS3 691 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 EXO1Q9UQ84 846 aaKnown RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ASB3Q9Y575 518 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 C4BPAP04003 597 aaKnown RBP14.59□□□□□ -0.07
COL5A1-201ENST00000371817 THBS2P35442 1172 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 TLE4Q04727 773 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 CDK5R2Q13319 367 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 DBX2Q6ZNG2 339 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 OR7G3Q8NG95 312 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 RNF141Q8WVD5 230 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ZNF559Q9BR84 538 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 RDH14Q9HBH5 336 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 TMEM59LQ9UK28 342 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 TRAV18A0A075B6X5 111 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 A0A1W2PQ09 198 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 HAS3O00219 553 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 EBLN1P0CF75 366 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 PLA2G7Q13093 441 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ADGRF1Q5T601 910 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 EEF1DP3Q658K8 133 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 STEAP4Q687X5 459 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 LINGO4Q6UY18 593 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 SIAH1Q8IUQ4 282 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 RDH10Q8IZV5 341 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 GPR152Q8TDT2 470 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 FAM53CQ9NYF3 392 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 FBXW11Q9UKB1 542 aa14.59□□□□□ -0.07
COL5A1-201ENST00000371817 ERI3O43414 337 aaKnown RBP14.58□□□□□ -0.07
COL5A1-201ENST00000371817 TYROBPO43914 113 aa14.58□□□□□ -0.07
COL5A1-201ENST00000371817 TAGLN2P37802 199 aaKnown RBP14.58□□□□□ -0.07
COL5A1-201ENST00000371817 UBE2NLQ5JXB2 153 aa14.58□□□□□ -0.07
COL5A1-201ENST00000371817 LCN8Q6JVE9 175 aa14.58□□□□□ -0.07
COL5A1-201ENST00000371817 IFT22Q9H7X7 185 aa14.58□□□□□ -0.07
COL5A1-201ENST00000371817 IL26Q9NPH9 171 aa14.58□□□□□ -0.07
COL5A1-201ENST00000371817 DEPDC5O75140 1603 aa14.58□□□□□ -0.07
COL5A1-201ENST00000371817 MAFO75444 373 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-201ENST00000371817 C6P13671 934 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 KEAP1Q14145 624 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 RNF212Q495C1 297 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 FAM185AQ8N0U4 392 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 FBXO24O75426 580 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 RAB33AQ14088 237 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 ADGRA1Q86SQ6 560 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 RCBTB1Q8NDN9 531 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 LINC01599Q8WXQ3 324 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 KIAA1191Q96A73 305 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 WDR77Q9BQA1 342 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-201ENST00000371817 BEX5Q5H9J7 111 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 OR6N1Q8NGY5 312 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 MAL2Q969L2 176 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 INTS6Q9UL03 887 aaKnown RBP14.58□□□□□ -0.08
COL5A1-201ENST00000371817 RNF212BA8MTL3 300 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 OR2C1O95371 312 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 LGALS2P05162 132 aa14.58□□□□□ -0.08
COL5A1-201ENST00000371817 TYRP14679 529 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms