RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 GPR4P46093 362 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 ZXDBP98169 803 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 LRFN4Q6PJG9 635 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 RDH12Q96NR8 316 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 PLEKHA6Q9Y2H5 1048 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 NSG1A0A0A6YYJ2 146 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 TRAPPC13A5PLN9 417 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 EFCAB7A8K855 629 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 SRPX2O60687 465 aaPredicted RBP13.96□□□□□ -0.17
NDC1-201ENST00000371429 SEMA3DO95025 777 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 MFSD13AQ14CX5 517 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 SF3B4Q15427 424 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■■■□ 20.7
NDC1-201ENST00000371429 EEF1A1P5Q5VTE0 462 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 THOC7Q6I9Y2 204 aaKnown RBP13.96□□□□□ -0.17
NDC1-201ENST00000371429 HMBOX1Q6NT76 420 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 TEX26Q8N6G2 289 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 CCM2LQ9NUG4 571 aaPredicted RBP13.96□□□□□ -0.17
NDC1-201ENST00000371429 TBC1D24Q9ULP9 559 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 RACK1P63244 317 aaKnown RBP13.96□□□□□ -0.17
NDC1-201ENST00000371429 BLMHQ13867 455 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 CARTPTQ16568 116 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 OCLNQ16625 522 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 LIX1LQ8IVB5 337 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 ZNF611Q8N823 705 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 PGAM5Q96HS1 289 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 ULBP3Q9BZM4 244 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 SLC7A11Q9UPY5 501 aa13.96□□□□□ -0.17
NDC1-201ENST00000371429 RPH3AQ9Y2J0 694 aaPredicted RBP13.96□□□□□ -0.17
NDC1-201ENST00000371429 SLC35F4A4IF30 521 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 ORC5O43913 435 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 CXCL10P02778 98 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 PBX2P40425 430 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 EIF2DP41214 584 aaKnown RBP13.96□□□□□ -0.18
NDC1-201ENST00000371429 TYSND1Q2T9J0 566 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 C9orf50Q5SZB4 431 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 ARHGAP11AQ6P4F7 1023 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 NHSQ6T4R5 1651 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 HACD2Q6Y1H2 254 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 OR8J1Q8NGP2 316 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 OR5K2Q8NHB8 316 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 NTMT1Q9BV86 223 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 TMEM185BQ9H7F4 350 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 CUTCQ9NTM9 273 aa13.96□□□□□ -0.18
NDC1-201ENST00000371429 TRNAU1APQ9NX07 287 aaKnown RBP13.96□□□□□ -0.18
NDC1-201ENST00000371429 SNNO75324 88 aaPredicted RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 PABPC4LP0CB38 370 aaKnown RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 CELP19835 753 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 MMP12P39900 470 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 GTF2IRD2BQ6EKJ0 949 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 GTF2IRD2Q86UP8 949 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 CIDECQ96AQ7 238 aaPredicted RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 FKBP10Q96AY3 582 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 NXPE2Q96DL1 559 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 TCTN2Q96GX1 697 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 SECISBP2Q96T21 854 aaKnown RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 ZNF432O94892 652 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 HIST1H1TP22492 207 aaPredicted RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 ARPC4P59998 168 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 ACTC1P68032 377 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 ACTA1P68133 377 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 SMAD4Q13485 552 aaKnown RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 SPIN3Q5JUX0 258 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 DCAF12Q5T6F0 453 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 AKAP14Q86UN6 197 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 NAGSQ8N159 534 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 PGBD5Q8N414 524 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 PITX2Q99697 317 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 SLC6A17Q9H1V8 727 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 CDH10Q9Y6N8 788 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 TEX13CA0A0J9YWL9 993 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 H3BML4 177 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 YKT6O15498 198 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 HOXC11O43248 304 aaPredicted RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 SCRG1O75711 98 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 CCNKO75909 580 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 CDRT1O95170 752 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 APOL3O95236 402 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 OXSR1O95747 527 aaPredicted RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 CLIC3O95833 236 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 DCNP07585 359 aaKnown RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 OR1D4P47884 311 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 CRISP1P54107 249 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 FOXA1P55317 472 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 CEACAM7Q14002 265 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 RGNQ15493 299 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 RSPO2Q6UXX9 243 aaPredicted RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 TMEM184AQ6ZMB5 413 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 FTMTQ8N4E7 242 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 OR9A4Q8NGU2 314 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 BORCS8Q96FH0 119 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 KATNBL1Q9H079 304 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 CUEDC1Q9NWM3 386 aaPredicted RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 EIF3KQ9UBQ5 218 aaKnown RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 VDAC3Q9Y277 283 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 SDC1P18827 310 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 PRDX3P30048 256 aaKnown RBP13.95□□□□□ -0.18
NDC1-201ENST00000371429 ADRA1AP35348 466 aa13.95□□□□□ -0.18
NDC1-201ENST00000371429 HK3P52790 923 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms