RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 A0A1W2PP55 124 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 MEIOCA2RUB1 952 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 MGAT4DA6NG13 374 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 TLR4O00206 839 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 FOXE1O00358 373 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 CTDSP2O14595 271 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 MID1O15344 667 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 YY2O15391 372 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 PROM1O43490 865 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 TBX19O60806 448 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 PDE9AO76083 593 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 GADD45GO95257 159 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 ANXA4P09525 319 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 NUDT7P0C024 238 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 IL7P13232 177 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 ATP1B2P14415 290 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 ZNF30P17039 623 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 ERP29P30040 261 aaKnown RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 CTSOP43234 321 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 CCR5P51681 352 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 SMIM11AP58511 58 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 GNG2P59768 71 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 ST8SIA6P61647 398 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 SNRPD1P62314 119 aaKnown RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 ZNF763Q0D2J5 394 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 GAB1Q13480 694 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 CDH18Q13634 790 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 RIN1Q13671 783 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 C1DQ13901 141 aaKnown RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 PTPRRQ15256 657 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 MED22Q15528 200 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 DUSP7Q16829 419 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 GLYR1Q49A26 553 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 ZNF770Q6IQ21 691 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 CRTC1Q6UUV9 634 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 DHRS13Q6UX07 377 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 Q6ZPB1 254 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 IKBIPQ70UQ0 350 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 NRARPQ7Z6K4 114 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 GALNT10Q86SR1 603 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 NOXA1Q86UR1 476 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 THOC6Q86W42 341 aaKnown RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 PLCZ1Q86YW0 608 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 GALNT12Q8IXK2 581 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 NAGSQ8N159 534 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 PSD4Q8NDX1 1056 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 OR7G1Q8NGA0 311 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 OR2AP1Q8NGE2 309 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 OR4A15Q8NGL6 344 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 OR56A3Q8NH54 315 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 FAM131CQ96AQ9 280 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 SLC6A18Q96N87 628 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 BBC3Q96PG8 261 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 OR5M11Q96RB7 305 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 ELF4Q99607 663 aaPredicted RBP10.89□□□□□ -0.67
USF1-201ENST00000368019 MARCH7Q9H992 704 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 TMEM184CQ9NVA4 438 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 DKK3Q9UBP4 350 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 SSR3Q9UNL2 185 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 ICKQ9UPZ9 632 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 PCDHGA1Q9Y5H4 931 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 MAU2Q9Y6X3 613 aa10.89□□□□□ -0.67
USF1-201ENST00000368019 A0A0U1RQS6 177 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 EDDM13A0A1B0GTR0 161 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 A8MU76 341 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 FAAHO00519 579 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 LATO43561 262 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 TPST2O60704 377 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 CSO75390 466 aaKnown RBP10.88□□□□□ -0.67
USF1-201ENST00000368019 MFN2O95140 757 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 IFNW1P05000 195 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 CD22P20273 847 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 CRYBB2P43320 205 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 NUDT6P53370 316 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 RAB25P57735 213 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 CDK6Q00534 326 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 DOC2AQ14183 400 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 LARS2Q15031 903 aaKnown RBP10.88□□□□□ -0.67
USF1-201ENST00000368019 SPHARQ15513 63 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 ZNF79Q15937 498 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 XKR6Q5GH73 641 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 PRAMEF14Q5SWL7 426 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 C6orf183Q5T699 404 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 MFSD4BQ5TF39 518 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 KLHL17Q6TDP4 642 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 CD300LDQ6UXZ3 194 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 TMPRSS12Q86WS5 348 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 GATAD2AQ86YP4 633 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 APCDD1Q8J025 514 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 OR8H2Q8N162 312 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 OR8J1Q8NGP2 316 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 SAP25Q8TEE9 199 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 ASZ1Q8WWH4 475 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 AP3S1Q92572 193 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 ZNF764Q96H86 408 aaPredicted RBP10.88□□□□□ -0.67
USF1-201ENST00000368019 TEFMQ96QE5 360 aaKnown RBP10.88□□□□□ -0.67
USF1-201ENST00000368019 VPS35Q96QK1 796 aa10.88□□□□□ -0.67
USF1-201ENST00000368019 COQ7Q99807 217 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms