RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 CRHBPP24387 322 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 CCR6P51684 374 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 COQ5Q5HYK3 327 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 TMEM220Q6QAJ8 160 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 SLC36A4Q6YBV0 504 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 TRAPPC6BQ86SZ2 158 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 SLC9B2Q86UD5 537 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 DEFB119Q8N690 84 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 C4orf32Q8N8J7 132 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 RANBP9Q96S59 729 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 SLC25A18Q9H1K4 315 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 RPP40O75818 363 aaKnown RBP10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 RFC2P35250 354 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 SEC23BQ15437 767 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 LRRC26Q2I0M4 334 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 TMEM164Q5U3C3 297 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 OR56B2PQ8NGI1 322 aa10.59□□□□□ -0.71
CDC42BPA-205ENST00000366769 ADAMTS3O15072 1205 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 DFFBO76075 338 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 EBLN1P0CF75 366 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ZBED6CLQ96FA7 236 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CRLF2Q9HC73 371 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 B4GALT2O60909 372 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 S100A8P05109 93 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 PTPRAP18433 802 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 RPIAP49247 311 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 UNQ6126/PRO20091Q6UXV3 157 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 DNERQ8NFT8 737 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CDCA5Q96FF9 252 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ORAI3Q9BRQ5 295 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 FBRSL1Q9HCM7 1045 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 PCDHGB7Q9Y5F8 929 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 A0A1W2PP18 115 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 FAM227AF5H4B4 570 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 GRB7Q14451 532 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 BAIAP2L2Q6UXY1 529 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 WDR53Q7Z5U6 358 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 NAA40Q86UY6 237 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 PLD6Q8N2A8 252 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 SPHK1Q9NYA1 384 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 FZD1Q9UP38 647 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 SNNO75324 88 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 DNAJB1P25685 340 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ZNF701Q9NV72 531 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 DUS2Q9NX74 493 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ERVW-1Q9UQF0 538 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 NEO1Q92859 1461 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 DCDC2BA2VCK2 349 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 EFCAB7A8K855 629 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 YDJCA8MPS7 323 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 MMP20O60882 483 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 LIPCP11150 499 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 NME2P22392 152 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 AKR1C3P42330 323 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CLRN1P58418 232 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 FAM83HQ6ZRV2 1179 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 GPR149Q86SP6 731 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 FAM46DQ8NEK8 389 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ESAMQ96AP7 390 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 PIP5K1AQ99755 562 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 TAS2R16Q9NYV7 291 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 A8MT66 165 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 TMEM11P17152 192 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 UBE2KP61086 200 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CHIT1Q13231 466 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 YIF1BQ5BJH7 314 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CARD17Q5XLA6 110 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 SMAP2Q8WU79 429 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 FRZBQ92765 325 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ZFR2Q9UPR6 939 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ICKQ9UPZ9 632 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 NME4O00746 187 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 TCAPO15273 167 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 SC5DO75845 299 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 TNFSF8P32971 234 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 POLR2HP52434 150 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 RCBTB1Q8NDN9 531 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 P2RX7Q99572 595 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CCM2Q9BSQ5 444 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 PRORSD1PA6NEY8 169 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ARGFXA6NJG6 315 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 LSSP48449 732 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 TAF10Q12962 218 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 KIAA0141Q14154 515 aaPredicted RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 TRAM2Q15035 370 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 ADPRMQ3LIE5 342 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 GIMAP1Q8WWP7 306 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.723e-11■■■□□ 16.9
CDC42BPA-205ENST00000366769 ADM5C9JUS6 153 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 TGOLN2O43493 480 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CACNG3O60359 315 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 RAB3DO95716 219 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 H1F0P07305 194 aaKnown RBP10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 BCL2A1Q16548 175 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 CHRFAM7AQ494W8 412 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 LINC01599Q8WXQ3 324 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 HSFX1Q9UBD0 423 aa10.58□□□□□ -0.72
CDC42BPA-205ENST00000366769 SLX4Q8IY92 1834 aa10.57□□□□□ -0.72
CDC42BPA-205ENST00000366769 PKMP14618 531 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms